Amphiprion ocellaris (clown anemonefish): 111577937
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Entry
111577937 CDS
T06018
Symbol
samd1b
Name
(RefSeq) atherin isoform X1
KO
K26266
sterile alpha motif domain-containing protein 1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aoce03036
]
111577937 (samd1b)
Chromosome and associated proteins [BR:
aoce03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Other PRC associated proteins
111577937 (samd1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAMD1_SHD
SAMD1_WH
SAM_1
SAM_2
SAM_PNT
DUF4777
Motif
Other DBs
NCBI-GeneID:
111577937
NCBI-ProteinID:
XP_023140234
Ensembl:
ENSAOCG00000019187
LinkDB
All DBs
Position
4:7550458..7566578
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AA seq
655 aa
AA seq
DB search
MSEPNKYREWILETIDSLRSRKARPDLERICRMVRRRHGSDPDRTRTELEKLIQEQTVLK
VSYKGSISYRNAAKVQRKSRKKSEFTAAGSSSSGGGAEAARERTKHDPGNNNGDSAHSFT
DQEEGEENSEPSPDPRTQTSGSHTGKKLKPASSPSSGNGCGATTGCAVGSGCKEEKASAP
RDKGLAGESPSPSLGHRTGAHDGGDAGRTAGSGADAVGAGKEPGVSGADSRSKTCSGSVN
SPQQHQRQKQIVPLKPKLKLAGGSTKTAGNHASPDLGDRLVASVRSLSEKSLRGGSAAAA
AAATRGHMKPLGLKEILGYLSSQERLSEEKLTRGKVKVVMEREVARGRLRRTRCGNITLP
LRGTVVEERKNASADRLARSALQDKHTVTKPPSPPPSHEQNEPIEAASGEEERRENEEEM
EMEEDDPRSSDEEGGLSPVAMTTEPGLIEKTTEDAEIQAASKQESSLHQLQQGGKAVSGL
DFLPKTPPPVQGAPQCNGAHMEERTAAPDQLHVQADNQTQPDGTNHTSSGFNNLECKTEV
GVSSCLLTPTASPRDSGLSEERGISVSSGGLIKSEGASGSPVDWTVSDVVSYFTAAGFPE
QAAAFRTQEIDGKSLLLMQRNDVLTGLSIRLGPALKIYERHVKVLQKTHFEDDDC
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaacccaacaagtaccgagagtggatactggaaacaatcgactctctccgctcg
aggaaagcccgtccggatctggagaggatctgtcgaatggtccggagacgacatgggtca
gacccggaccgaaccaggacagaactggaaaaactgatccaagagcagaccgtgctcaaa
gttagctacaaggggtccatatcgtaccggaacgcggcgaaggtgcagagaaaaagccga
aagaagagtgagtttacggccgctggaagcagcagcagcggcggcggcgcggaggcagcg
agggagcgaaccaaacacgatcccgggaacaacaacggcgacagtgcgcacagcttcacc
gaccaggaggagggagaggagaactcggagcccagcccagatccccgcactcaaacatca
ggcagccacaccggcaagaagctcaagcctgcctccagcccgagtagcggaaacggttgt
ggcgcaacaacgggctgcgctgtcgggagcggctgtaaagaagagaaagcaagtgcaccg
agagacaagggattagcgggggaaagcccgtcgccctctttgggccacagaacaggcgca
cacgacggtggggatgccggcaggacagcggggagcggagctgatgcagttggcgcgggg
aaggagcccggtgtgtccggagctgacagccggagcaaaacttgctccgggagcgtcaac
agcccccagcagcaccagagacagaagcagattgtgccgctgaaacccaaacttaagctg
gcgggaggcagcaccaaaaccgcggggaaccacgccagccccgacctgggcgacagattg
gtggcttctgttcgcagcctgtccgagaagagcctccgagggggctccgctgccgccgcc
gccgctgcgaccagaggccacatgaagccgctcgggctgaaggagattctgggttatctg
agcagccaggagcggctgtcggaggagaagctgacccgaggcaaagtcaaagtggtcatg
gagagagaggtggcgaggggccggctgcgcaggacccgctgcgggaacatcactcttcct
ctgcgggggacggtggtggaggagcggaagaatgcgtccgctgacagacttgcgagaagc
gcactgcaggacaaacacacggtgacaaagcctccgtcgccgccgccgtctcacgagcag
aatgagccgatagaagcagccagtggagaagaggagcggagagagaatgaggaagagatg
gagatggaggaggatgatccccggagttctgatgaggagggaggactatccccggtagct
atgacaaccgaaccagggctcattgagaaaaccacagaagatgctgagatccaggcagca
tcaaagcaggagagcagcctccatcagctgcagcagggtggcaaagcagtgtccggactt
gatttcctccccaaaacgcctccacctgttcagggagccccacagtgtaacggtgcacac
atggaggagagaactgctgcccccgatcagctacatgtgcaagcagataatcagacgcag
cctgacggaaccaaccacacctcctcaggctttaacaacctggagtgtaagacagaggtc
ggtgtgtcgtcatgcctgctgacacccactgcctccccgagagactccggcctgtctgaa
gagcgagggattagtgttagcagtggagggcttattaaatctgagggtgccagtgggagc
ccggtggactggacagtgtctgatgtagtcagttatttcaccgcagcaggtttcccagag
caggctgctgccttcaggacccaggaaatcgacggaaagtctctcctcctcatgcagcgt
aatgatgtgttgactggcctatcgatcaggctcggacccgccctcaagatctacgagcgc
cacgtaaaggttctgcagaaaacacactttgaggatgacgactgctaa
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