Amphiprion ocellaris (clown anemonefish): 111578163
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Entry
111578163 CDS
T06018
Name
(RefSeq) probable ribonuclease ZC3H12D
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoce03019
]
111578163
Messenger RNA biogenesis [BR:
aoce03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
111578163
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
111578163
NCBI-ProteinID:
XP_023140556
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Position
12:22687715..22700741
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AA seq
591 aa
AA seq
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MIQNKEARRRIPQSDSPEQKKSSESAMDHQQHAKVERFLKLGYSHSDILRVLESLRHDAQ
TNDILEELIKTCHTRSSNSSVPNSPKLVPRGCSPSSNQTRPGPDREPAAGFRPVVIDGSN
VAMSHGDKKVFSCQGLQLAVNWFWDKGMRDITVFVPLWRKELPRPEAPITEQHILHELER
RKILVYTPSRCVNGKRVVCYDDRYIVKLAFDSDGIIVSNDNYRDLQTENPQWKKFIEERL
LMYTFANDKFMPPDDPLGRNGPTIDDFLRKKPWTTDNKLQHCPYGKKCTYGVKCKFYHPE
RANQSQLSVADELRALRDRAKNFSPASYPELRYTSSTPPPLNIDDHRASPSEHSVCQRDS
SSPRSQPYTSLHHFPCLDVDEAFSSMESSMSRLYIQDNPYSLEQPLHSYSSGVASYSLGH
DDYSLSGSYGSSNQHLCLNRGGLYPHQNGSLSCDCSMCGQCRCGHQQARLSPISHHHHHH
QPAWSSCPALPPHNREHPAHFSDSQYVRQTSRRHTHSLPRDPWVQGSLSGPVPISRSKSP
SSEQRKGLRSQLTTLFPQSMVEQVMNAYPHVSDMSELISLIQSYRTNQISF
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgatccagaataaggaggcgaggaggaggattccccaatcagacagtcctgagcagaag
aagagctcagagtcagccatggaccaccagcagcacgccaaagtggagcggttcctcaag
ttgggatactctcacagcgacatcctgagggtgctggagagcctccgacacgatgcccag
accaacgacatcctggaggagctgatcaagacctgccacactcgcagcagcaacagcagc
gtcccaaacagccccaaactggtgcccagaggctgcagcccaagttcaaaccagaccaga
cctggaccagacagggaaccggccgctgggttcagaccagtggtgatagacggcagcaat
gtggccatgagccatggcgacaagaaggtgttttcatgtcaaggcctccagctggcagtg
aactggttctgggacaaaggcatgcgagacatcacggtgttcgtccccctgtggaggaag
gagctgccaaggcctgaggcacccatcacagaacaacatattctccacgagctggagagg
aggaagatcctggtgtacacgccgtcccgctgtgtaaacggcaagagggtagtctgctac
gatgaccggtacatcgtaaagctggccttcgactcagatggcatcatcgtgtccaacgac
aactaccgagacctgcagactgagaatccccagtggaagaagttcatagaggaacggctg
ctgatgtatacgttcgccaatgacaagttcatgcctccagatgatcctctgggcagaaat
ggtcccactattgatgattttctcaggaagaagccatggaccacagataataagctgcaa
cactgtccatacggtaagaagtgtacttatggagtaaagtgcaagttctaccatccagag
agggccaaccagtcgcagctgtctgtggctgatgaactgagagctctaagggacagagcc
aagaacttctcccctgcttcatatccggagctcagatacacctcgtccacccctccaccc
ctgaacatagacgaccacagggcttcacccagcgagcactccgtctgtcaaagggattcc
agcagccccagaagccagccgtacaccagcctgcaccacttcccgtgcctggacgtagac
gaagccttcagctccatggagagctccatgtccaggctctacatccaggacaacccctac
agtctggagcagccactgcacagctacagcagcggcgtggcgagctacagcctgggccac
gacgactactccctctcaggttcgtatggcagcagcaaccagcatctctgcctgaatcga
ggaggtctctaccctcatcagaacggctcgttgtcctgcgactgctccatgtgtggccag
tgcaggtgtggtcaccagcaggcccggctgtcccccatcagccaccaccatcaccaccac
cagccagcgtggagctcctgcccggcgctgccgccacataacagggaacatcccgctcat
ttctcagatagccagtacgtcaggcaaacctccagaagacacacccacagtctgccgagg
gacccgtgggtgcagggaagcctctcgggccctgtgccgatcagcaggtccaagagtccg
tccagcgagcagaggaagggcctgaggagccagctgaccacgctgttcccccagagcatg
gtggagcaggtcatgaacgcttacccacatgtctcagacatgtctgaactgatttctctg
attcagagctacagaaccaaccaaatctccttctag
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