Amphiprion ocellaris (clown anemonefish): 111578293
Help
Entry
111578293 CDS
T06018
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111578293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aoce03021
]
111578293
03036 Chromosome and associated proteins [BR:
aoce03036
]
111578293
Transcription machinery [BR:
aoce03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
111578293
Coactivators
SAGA/TFTC/STAGA complex
111578293
Chromosome and associated proteins [BR:
aoce03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
111578293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
111578293
NCBI-ProteinID:
XP_023140729
Ensembl:
ENSAOCG00000004919
UniProt:
A0A3Q1AKT9
LinkDB
All DBs
Position
3:40804890..40819077
Genome browser
AA seq
969 aa
AA seq
DB search
MAGASDPLEDMLFTEVDEKAVSDLVGSLESQLGDRNTPAASYSDGKREAAAAAAGHFSGK
VRDPAGSAEPQQGHPKAGLTLESGANEPLSGKSLPSSTSAAAGAGISPGASLPAAGAAPP
AVSPGPGPVTLSTQPATAASFQRAAVLGLSAAPGGSAVPAAPAAEVRTSSPGVQSLNGGA
VKLVNSPGVPPPAPPAGAGSVISGNSAIIAPSFPVSSPAVALQRLPSPATSVAQNGVDPK
ASPLVAPTVSSAPVLNHSSPLMHTKMLVPGQPASGSSVILTSTPPPAAQSPISQTQTGTS
PAPTVTLAKPTLNGVAQPAVAVVRPPGAAVVATSIPQQRPGLVAAARPAAPQPALAVRPQ
QQTTIQLPPGFTMPPGMVLVRTEAGQLVMVPQQVLAQAQAKTQQGQTVANISPRPTAPTA
GATIRVSTATTAPGAQTVRLASPTQPRMVQSPATTTVQKTLAVAPGAAAVSVKMAPQRTP
TVITAGGTTGAKPTGVQSSPMTSTTPSTTASPAARVSVVSQEMQENVKKCKNFLATLIKL
ASHNSPSPDTSKNVKALVQDLLDAKIEPEEFTTRLQAELKSSPQPYLIPFLKKSLPALRQ
SLLSSQQSLMTAPPTTSAPPLAAPASVTTGATIRPRLPIGSTSATVRLNTPINTAALVGR
PGVQTRSPVVISQTFRPAGTLIRGPTTIAGKTPVNLTAQANQKKLSDPGGGTFRDDDDIN
DVASMAGVNLNEENARILATSSELVGTKIRSCKDESFLPTGLLHRRILDTAKKLGVTEVP
LEVVNFVSHATQSRLRSLLERVSAVAQHRTDGGKDEELHEQTSDVRSQLRFFEQLERMEK
QRKDEQEREMLLKAAKSRARQEDPEQARLKQKAKEMQQQELAQMRQRDANLTALAAIGPR
KKRKLDSPGASSGNEVASGSGPSSSVPASSSRQQVRQRITRVNLRDFIFCLEQDRGTARS
LMLYKALLK
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagcttccgacccactggaggacatgctcttcaccgaggtggacgagaaggcg
gtcagcgacctggtgggctccctggagtcccagctgggcgacagaaacactcccgccgct
tcttattccgacgggaaacgggaggcagctgcggccgctgccggccacttctcagggaaa
gtgcgcgatccggcggggtccgcggagccgcaacaagggcatccaaaagcggggttaacc
ctggaatcgggcgctaacgagccgctgtccgggaaaagcctcccctcctctacctccgct
gccgccggggccgggatctcccccggagccagcctgccggccgccggagcggctcccccg
gctgtttccccgggaccgggacccgtaactttgagcactcagcccgccaccgccgctagc
ttccagcgggcggctgtcctgggtctcagcgcggctcccggcggctcggcggtgccagcg
gcgcccgcggcggaggtccggacctcctctcccggggtgcaaagtttgaacggcggcgcg
gtaaagttggtgaactcgcccggggtccctccacccgctccgcccgcaggggccggctcg
gtgatcagcgggaactccgctatcatcgcccccagcttcccggtgagctcccccgccgtg
gccctccagaggctccccagcccggcgaccagcgtggcccagaacggggtggaccccaag
gcgtccccgctagtggccccgaccgtctccagcgctccggtcctgaaccacagcagccct
ctgatgcacaccaagatgctggttccgggtcagcccgcctccgggagctccgtgatcctg
accagcacccccccaccggccgcccagtcccccataagccaaacccagaccgggaccagt
ccggcgcccaccgtcaccctggccaagcccacgttgaacggggtggcccagcctgcggtg
gccgtggtccggccgcccggcgctgcggtggtggctacctccatcccgcagcagagaccc
gggctggtggccgccgcccggccagcggccccccagccggccctggctgtccgaccccag
cagcagaccaccatccagctgccccccggcttcaccatgcctccaggcatggttctggtc
cggaccgaggcgggtcagctggtcatggttccacagcaggttctggctcaggcccaggcc
aagacccagcaaggccagacggtggccaatatcagccccagaccgacggcgcccacagcc
ggcgccaccatccgggtcagcactgccaccacggctcctggagctcagaccgtccgcctg
gcatcccccactcagcccagaatggttcagtcccccgccaccaccaccgtacagaagaca
ctcgccgtggcgcccggtgccgccgccgtgtcggtaaagatggcgccgcagagaactccg
accgtcatcacggctggtgggacgaccggcgcgaaaccgaccggcgtccagtcgtccccc
atgaccagcaccaccccctccaccaccgcctcacccgctgccagagtctccgtggtgtca
caggaaatgcaggaaaacgtgaagaaatgcaagaacttcctggcgacgctcatcaagctg
gcgtctcacaactctccctccccagatacctccaagaatgtgaaggccctggtccaggac
ctgctcgatgcaaagattgagcctgaggagttcaccactcggctgcaggctgagctgaag
tcctccccacagccctacctcatccccttcctcaagaaaagccttcccgctctgcgtcag
tcgttgcttagcagccaacagtctctgatgaccgcaccccccaccacctcagcccctccc
ctggctgcccccgcatccgttaccactggcgccaccatcagaccaaggcttccgattgga
tcaaccagtgcgaccgtcaggctgaacacacccattaacacggcagctctggtgggtcgt
ccaggtgttcagactcggtctcctgtggtcatcagtcagacgttcagacctgcaggtaca
ctcatacgaggacccacaaccatcgccggcaaaactcctgtgaacctgacagcacaagcc
aatcagaagaagctgagcgacccagggggcgggactttcagagacgatgatgacatcaac
gatgtggcgtcgatggctggcgtcaacctgaacgaggagaacgctcgtatcctagcaacc
agctcggagctcgtcggaaccaagatccgatcctgcaaagacgaatcattcctgcccacc
ggattgctgcaccgccgcatcctcgacacagctaagaagttgggtgtcaccgaggttcct
ctggaggtggtgaacttcgtctcccacgccacccagtccagactccgctcgctgctggag
agagtttcagccgtggctcagcaccgcaccgacggagggaaggatgaagaacttcatgag
cagacgtcagacgttcgttctcagcttcgtttcttcgaacagctggagaggatggagaag
cagaggaaggatgagcaggagagagagatgctgctgaaggctgccaagagtcgcgccaga
caggaagatcctgaacaggcccgtctgaagcagaaagctaaagagatgcagcagcaggaa
ctggctcagatgcgacagcgagacgccaacctcacggctctggccgccatcggacctcga
aagaaacgtaaactggactcacctggagcctcgagtggaaacgaggtggcgtccggttcc
ggcccttcctcctcggttccagcgtcttcgtcccggcagcaggtccgtcagcggatcact
cgggtcaacctcagggacttcatcttctgcctggagcaggaccgcggcacggcacgttct
ctgatgctctacaaggctctgctcaaatga
DBGET
integrated database retrieval system
