Amphiprion ocellaris (clown anemonefish): 111578473
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Entry
111578473 CDS
T06018
Symbol
srrm1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03013
Nucleocytoplasmic transport
aoce03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111578473 (srrm1)
03015 mRNA surveillance pathway
111578473 (srrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoce03019
]
111578473 (srrm1)
03041 Spliceosome [BR:
aoce03041
]
111578473 (srrm1)
Messenger RNA biogenesis [BR:
aoce03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
111578473 (srrm1)
Spliceosome [BR:
aoce03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
111578473 (srrm1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
DUF2457
Motif
Other DBs
NCBI-GeneID:
111578473
NCBI-ProteinID:
XP_023141074
Ensembl:
ENSAOCG00000021757
UniProt:
A0A3Q1BT99
LinkDB
All DBs
Position
20
Genome browser
AA seq
862 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLDKKVDMTKVNLEVIKPWITQRVTEIL
GFEDDVVIEFIFNQLEEKHPDSKMMQINLTGFLNGKNAREFMKDLWPLLLSAQDNIAGIP
SAFLEQKKEEIKQRQIEQEKLASLKKIDEDKKDKDIRERAQSKSPRRRKTRSPSPRRRSP
AKRERKRSPSRSPRRKASPISSSSPPPPLMQLPTKPLEQLVETDTPGRAVPEPIIQEASS
TCDAVVEVVKADSVTEVKEPSPERSHKKEDRPRSREREKDTRRERPHHRSRSHSRSRRRR
SRSRSYSPRRRQSPRRRMSPRRRSPPRRGPTSSRHRHRRSPVRRRRSRSASSSGSSSSGS
RSPKKAMKRISNTPPRKQAHHLDTSISPAGKERRSPSPRARRGRGSASPPRSAGLKRKQG
GRGDSPSDNAKARPSEGSESEEDKNEKGATADSVQQRRQYRRQNRQSSSDTGSSSSEDEG
PKRPTAGPGARNGEVRRRRSRTPSPRRRHRDASPRKRRSPSPARRRRSPSPPRRRRSPSP
PPRRRSPSPPPRRRSPSPRRYSPPIQRRYSPSPLPPPKRKLSNSPPKRSSPGAKRRPSRS
PKRRSSPAPRRRSPPSSASPPRHRRSPMLPSVRPSRDTRSPVGSARRFSPSPVNRGRTVR
GSSSPQGRFETSSTSPLNQRRQQSPSHSSKLIRRVSRTPEPRNNQRPSPSPQPMRRVSSR
SRSVSPQPVAQKRPAPASASPSPSRSVSGSPPPAKKASSGSGSRSPSKTSDVDVSGKKKK
KKKEKKHKKEKKHKKHKKHKKEKSGAAVSGDGPENQGVEEDGDSRKESDSEVDDSLDDLE
KHLREKALRSMRKAQLSPSQMS
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggtacaagtgcggagcaagacaaccgtttcagcaacaag
cagaaaaaactgctgaagcagctgaaatttgcagaatgtctggacaagaaggtggacatg
accaaagtgaacctagaagtcatcaaaccttggattactcagcgagtgacagagattctg
gggttcgaggatgacgtcgtcatagagttcatatttaaccagcttgaggagaagcacccg
gatagcaagatgatgcagatcaacctgacaggctttctgaatgggaagaatgcccgggag
ttcatgaaggacctgtggcccctgctgctgagtgcccaggacaacattgctggcatcccc
tctgcttttctggaacagaagaaagaggaaatcaaacagagacagattgaacaggagaag
cttgcttctctgaagaagatagacgaggacaagaaggacaaggacatcagagagagggct
cagtcaaagagcccaagaaggcgtaagacaaggtcaccatcaccacggcgaaggtcgcca
gcgaagcgggaaagaaagcgcagcccctcacgctccccaagacgtaaagccagtcctatt
agtagcagttcaccacctccaccgctgatgcagctgccaacaaaacctttggagcagctt
gtagaaactgatacaccaggaagagcagtgccagaaccaattatccaagaagcttcttcc
acctgtgatgcagttgtggaggtggtaaaagcagactcagtgactgaagtcaaagaaccc
tccccagaaagaagtcataaaaaagaggacagaccgaggtctcgtgaaagagagaaggac
accaggagggaaagacctcaccaccgctcccgttctcactcccgttctcgcagacgacgc
tctcgttcaagatcttattcccctcgtcgaagacaaagtcccagaaggagaatgtctcct
cgtcgaaggagtcccccaaggcgtggccccaccagctctagacacagacataggcgctcc
cctgtccgcaggaggcgttctcgctctgcttcatcctctggcagcagctcctcaggctct
cgctcacccaaaaaagcgatgaaaagaatatctaacacaccaccccgaaaacaggcccat
catcttgacacttcaattagccccgcagggaaagagagacgatcaccgtctccacgggcc
agaaggggccggggctctgcttcaccaccaagatcagcaggtttaaagcgaaaacaagga
ggaaggggtgattctccatctgataatgccaaggccagaccctctgaagggtcagagtca
gaggaggataaaaatgagaaaggggcaacagcagattcggtgcagcagcgacgtcagtat
cgcaggcagaatcgacagtcgtcctcagatacagggtcttcctcctcagaagatgaagga
cctaaaaggccaacagcaggaccaggggccagaaatggtgaagtcaggagaagacgaagc
cgtacaccctcccctaggaggcgacatagggacgcctcaccaaggaaaagacgttctccc
tctcctgcacgcagacgtcgctccccctctcccccacgacgtcgtagatctccctctcct
cctcctagacgcaggtctccttcgcctccaccccgccgtagatcgccgtcccccagacga
tattctccacccatccagcgacgttacagcccttcacctttgccacctccgaagaggaag
ctgtcgaattcacccccaaaacgttcttctccgggggccaaacgacgcccttccaggtct
cctaagcgtaggagctctcccgctccaaggagacgctcacctccctcctccgcatctcca
cccagacacaggaggagccccatgttgccttctgtcaggccaagcagggacacgcgatca
cctgttggatcagccagacgcttctccccgtcccctgtgaaccgcggtcgcactgttagg
ggttcctccagtcctcagggacgttttgaaacctccagtacatctccattgaaccagcgg
agacagcagtccccttcacacagtagtaaactcatccgcagagtgtcccgcacaccagag
ccacgcaacaaccagagaccgtctccgagcccccagcctatgaggagagtgtcctccaga
tccagatcggtgtccccgcaaccagtagctcaaaaacgtccagcccctgcatctgcctcc
ccctcaccatctcgctctgtcagtggatctccaccaccagccaaaaaggccagcagtggt
tctggcagtcgatctccaagcaagacgtccgatgttgatgtcagtggaaagaaaaagaag
aagaagaaggaaaagaaacataagaaagagaagaaacacaaaaagcacaagaagcataag
aaggagaagagcggtgcagctgtatctggggatggaccagagaaccaaggtgtggaggaa
gatggagattcgagaaaggaatcagacagtgaagttgacgacagcttggatgatctggaa
aagcaccttagagagaaggccctgcgctccatgagaaaagcccagttgtctccatcacag
atgtcctga
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