Amphiprion ocellaris (clown anemonefish): 111578578
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Entry
111578578 CDS
T06018
Symbol
rad23b
Name
(RefSeq) UV excision repair protein RAD23 homolog B isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03420
Nucleotide excision repair
aoce04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111578578 (rad23b)
09124 Replication and repair
03420 Nucleotide excision repair
111578578 (rad23b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
aoce03051
]
111578578 (rad23b)
03400 DNA repair and recombination proteins [BR:
aoce03400
]
111578578 (rad23b)
Proteasome [BR:
aoce03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
111578578 (rad23b)
DNA repair and recombination proteins [BR:
aoce03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
111578578 (rad23b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
Rad60-SLD_2
Crinkler
Metal_resist
Dsc3_N
CUE
UBA_3
OTU1_UBXL
Ubiquitin_5
Ubiquitin_4
PRCC
Motif
Other DBs
NCBI-GeneID:
111578578
NCBI-ProteinID:
XP_054875354
Ensembl:
ENSAOCG00000011996
LinkDB
All DBs
Position
17:11216670..11305392
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AA seq
386 aa
AA seq
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MQITLKTLQQQTFKIDIDEDETVKTLKERIEQEKGKDNFSVAGLKLIYAGKILSDDTALK
EYKIDEKNFVVVMVTKPKASSAAPQSSPTASAPSTTAPAAPPPSASSSDKPAEPASTDSK
PEERQSSTAKPSSTPVGSSETSTNTNLINEAVSTLVTGPSYDAMVNEMMLMGYEREQVVA
ALRASFNNPDRAVEYLLTGIPGRDQGPATGPDAVTPPVSGSPAASTGGISVPANAGSSPT
AGGGNPLSFLRNQPQFHVMRQLIQQNAALLPALLQEIGRENPALLQEISSHQEQFIQMLN
EPNPDAVPVGGGGGAGGAGGAGGLGGDTPGGSHMSYIQVTPQEKEAIERLKALGFPEGLV
IQAYFACEKNENLAANFLLQQNVDDD
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgcagataactttgaagaccttgcaacagcagacgttcaaaatcgacatcgatgaagac
gagacggtgaagacattaaaagagaggattgaacaggagaagggaaaggacaatttctcc
gttgccgggctgaaattgatatatgctggtaaaatcctcagcgatgacacagccctcaaa
gaatacaaaatcgacgagaagaactttgtggtcgtcatggtgacaaagcctaaagcatcc
tctgccgccccacagtcttcaccaactgcttcagctcccagcactacagctcccgcagca
cctcctccctcagcgtccagttcggacaaaccagcagagcctgcctccacagacagcaaa
ccagaagagagacagtcttcgacagccaaaccatcttccactcctgtcggtagctctgag
acttcaacaaacacaaatttaatcaatgaagcagtttcaactctagtgacaggcccttca
tatgacgccatggtgaatgagatgatgctcatgggctatgagagagagcaggtggtggca
gcactgagagcgagctttaacaacccagacagagctgtggaatacctgctcacaggcatc
ccaggcagagatcagggccctgcgactggccctgatgcggtgacgcctccagtgagtgga
tctccagctgcatctacaggcggtatcagtgttcctgccaacgctggctcctcaccaact
gctgggggaggcaatcctttgagcttcctaagaaatcagccccagtttcacgtaatgcga
cagctgatccagcagaatgccgccctccttcctgccttgttgcaggagattggcagggaa
aaccccgcactgttgcaggagatcagcagccaccaagagcagttcatccagatgctgaat
gaaccgaatccagatgcggtgccagtaggtggtggaggaggggcaggaggagcaggggga
gctggagggctgggaggtgacacacctggtggaagtcacatgagctatatccaagtcaca
ccacaggagaaagaggccattgagaggctaaaagctttaggatttccagagggacttgtt
atacaagcctactttgcttgtgagaagaatgagaacttggccgccaacttccttttacaa
cagaatgttgacgatgattaa
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integrated database retrieval system
