Amphiprion ocellaris (clown anemonefish): 111578717
Help
Entry
111578717 CDS
T06018
Symbol
pcdh12
Name
(RefSeq) protocadherin-12 isoform X1
KO
K16499
protocadherin delta 2
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
aoce04515
]
111578717 (pcdh12)
Cell adhesion molecules [BR:
aoce04515
]
Cadherins
Protocadherins
111578717 (pcdh12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
TMEM154
DUF5527
Motif
Other DBs
NCBI-GeneID:
111578717
NCBI-ProteinID:
XP_023141422
Ensembl:
ENSAOCG00000013411
LinkDB
All DBs
Position
13:complement(3127753..3152979)
Genome browser
AA seq
1174 aa
AA seq
DB search
MLLALLLVLSLCSEVFSSELSSITIQYRVWEEQPAGTQVGRLVDDLRQRDEGGLLEDFQV
VEQGKALPFSVTTRDGVVSTQGRVDREELCRGSDLCEVAFSVLYRKSGAVNCLRVRVEVM
DLNDHGPSFPSALQEVEISETANLRMRIPLDRAVDPDAGPNGLQTYSLSVNQHFALDVTV
GPGGTKQAELVVIKELDREVQDSFDLTLVAWDKGNPPKSGSTLVRVIIQDSNDNSPTFED
SSPTVELPEDTAIGTTIIKVKATDPDQGANGDVEYSFSKHTRPDVQKLFNVDPQTGAVSL
RAPLDYEAQSSYEVIIQASDRGPNAIPSHCKLHVKLIDVNDNAPRICMTWTPSHSPVASV
LEGASVDTFLALVMVSDADSGGNGQVDAVIKEGSGPFRLKQIHGDNYMIVTDGHLDREKI
MHYNITLLARDKGAPSLSCVEHLPVHVLDENDNSPIFSTSVYKASFKENNVAGYHALKVE
AHDVDQDLSGRVSYFMSNSIEQEAKTQSFSIHPKTGVISVQEPLDYEESHEFSFIVEAVD
HGHPPLTSTATVQINIEDVNDNYPVIKEPKPRKGVAYLSVPVNAYKGEIVTELGNDIDEG
TATLPVDHSVREGSTGFLASTIKAEDEDSGLNGELQYFITNGNPYGLFSLDQTTGQLFVN
TTNATELIGKTFKVDISVSDMGTPSLATKAALEVTFINLKDHLKNSSPGNRGQLSFTMMM
AICLGATCLLLLLAIALVTTFCRPEKRDNRAYNCRQAESSYTRHPRRPQKNIRKSDIQLI
PVIRGRKEDHPEDNGEAQPLTPPSVSEDLQTERQYNLMPSVLNTSFHSQGYVEDDATPPV
PHHCRTLRKPGNIELDGALPLTPATSYRTLRKARNPSSSSSASHSSTLKRQHHRESKEAE
LPRSPSQATLRRPKTSDGRGNHDAEHRQMLRNLVRLSMAAFGDSIELSSASPEVQQISQL
LSLLHQGQLQPRPNFRGNKYSHRTGRYGGQDGSDWQSTKDSGHGESEAGDMDWEPGRDSP
IDPQLEEGLNNLLNNPDDVFSEISDPSWMARLSLPLAGDYHDNVFVPNGPPSPESELLPR
DGLDSSSSFSTFGKTPEKDGPLGGALLSEVSTLFEMLMTQKADAHPGPRPDVLYRLSAAY
RRSLGLDGAANTTPKNSGNAEKPSGLTASSGLHQ
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgctgctggctctgcttctggttctgagtctttgctcggaggttttctcctcggagctg
tcatcaataactatccagtaccgtgtttgggaggagcagccggcgggaacccaggtcggc
cggctggtggacgacctccggcagagggatgaaggcggcctgctagaggatttccaggtg
gtggagcagggaaaagcccttcctttctccgtcaccactcgagacggggtcgtctccacc
cagggtcgggtggacagggaggagttgtgccgcgggtcggacctgtgcgaggtggccttc
agcgtcctgtacaggaagagcggcgccgtgaactgcctgcgggttcgtgtggaggtgatg
gacttgaacgaccacggtcccagctttcccagcgctctgcaagaagtggagatctcagag
actgccaacctcaggatgcggatccctttggatcgggcagtggatccggatgccggaccc
aacggcctccagacctactcgctgtctgtcaaccaacactttgctctggatgtgactgtc
ggtccaggtgggacaaaacaggcggagctggtggttattaaagagctagacagggaggtt
caggactcctttgacctcaccctggttgcttgggataaggggaacccaccaaaatctggg
agcacattagtccgggttattattcaggactccaatgataacagccccacgtttgaggac
agcagccccactgtggaactacctgaagatacagctattgggacaactattatcaaggtg
aaagccactgatccagaccagggcgccaatggggatgtggagtattcattcagtaaacac
actcgtccagatgttcagaaactctttaatgtggatcctcaaactggagctgtgagtctc
agagcacctctggattacgaggctcagtcttcttatgaagtgatcatacaggccagtgat
cgtgggcccaacgccatcccctctcactgtaaactgcacgtcaagcttatcgatgttaac
gacaacgcaccaaggatatgcatgacctggacaccatcccactcacctgtggcatccgtg
ctggaaggagcatcggtggacactttccttgccctggtgatggtctctgatgcagattca
ggaggaaatggacaagtggatgcagtcattaaggaagggtctggcccgttccgccttaaa
cagatccacggcgacaattacatgatcgtcactgatggccatctggatcgagagaagatc
atgcactacaacatcacgctcctcgctcgggataaaggagctccctcactgtcttgtgtt
gaacacctgcctgtccacgttttggacgagaacgacaactcccccatcttctcaacctcc
gtctacaaggcctccttcaaggagaacaatgtggcaggctaccatgctctcaaagtcgag
gcccacgacgttgaccaggacctcagtggaagagtgtcttacttcatgagcaactccatt
gaacaggaggctaaaacccagtctttctcaattcaccccaaaactggagtgattagcgtg
caggaacctttggactacgaggaatctcacgaattctctttcattgtggaggctgttgac
cacggacatccaccgctgacaagcacggccactgtgcagatcaacattgaggatgtaaat
gacaactacccggtcatcaaagagccaaaaccgagaaagggcgtggcttacctgagcgta
cctgtcaacgcttacaaaggggagatagtgaccgagctggggaacgacatagacgaggga
accgccactttaccagttgatcactcagtcagagaggggtccactggattccttgcatcc
acgataaaggctgaagatgaagactcgggcctaaacggagaactccagtacttcataacc
aatggaaacccgtacggactcttctcgctggatcagactacaggccagctttttgttaac
accactaacgctactgagctcattgggaaaacctttaaggtggacatttctgtgtctgac
atgggcactcccagcctggccacaaaggcggctctggaggtgacattcatcaacctcaaa
gaccatctgaagaactcgtcaccaggaaaccgtggccagctcagcttcaccatgatgatg
gcgatctgtctgggtgctacatgcctgcttctcctgctcgccattgctttggtgacgacg
ttctgccgcccagagaaacgggacaaccgggcctacaactgcagacaggctgagtccagc
tacacccgccatcctcggcgtcctcagaagaacatcagaaagtctgacattcaactaatt
cccgtcatccgggggcgaaaggaagaccatcccgaggacaatggcgaagcccagccactg
actccaccttcagtctcagaggatctacaaaccgagaggcagtacaacttaatgccatca
gttctgaacacgagcttccattcccaaggctacgtagaagatgacgcaactccaccagtc
ccccatcactgcagaacactcaggaaacctggaaacatcgaactggacggtgctttgcct
ctgacaccagccacgtcataccggactcttcgcaaagccagaaacccttcatcgtcttcc
tcggcctctcattcgagcaccttgaagcggcagcatcaccgtgaaagtaaagaagcagag
ctgccgaggtcgccatcgcaggcgactctcaggaggccgaagacctccgatggacgagga
aaccacgacgcagaacaccggcagatgctccgaaacttggttcgcctgtccatggctgcg
ttcggagactccatcgagctttcctcagcttccccagaggtgcagcagatctcccagctc
ctttctctcctccaccagggtcagctgcagccgaggcccaacttcagagggaacaaatac
tctcatcgtaccggcagatatggaggtcaggacggttccgactggcagagcaccaaagac
agtggacatggggagagcgaagccggagacatggactgggaacctggaagagactctccc
atagaccctcaactggaggaagggctcaacaacctgctcaacaaccccgatgatgttttc
tcagagatcagtgatccttcctggatggccagactctccctcccactcgccggcgattac
cacgacaacgtgttcgtccccaacggccctccgtcccctgaaagtgagctccttccccgg
gacggcctggactcctcctcctcgttctccacttttggtaaaactccagagaaggacggc
ccgctgggtggagctctgctgtcggaggtcagcacgctgttcgagatgctgatgacgcag
aaggccgatgcccaccccggccctcggcccgacgtcctgtatcgactctcggctgcgtac
cgccgctctctgggcctggacggtgctgcaaacactacaccaaagaactctgggaacgct
gagaaaccgtcgggcctgactgcatcctcaggacttcaccaataa
DBGET
integrated database retrieval system
