Amphiprion ocellaris (clown anemonefish): 111578922
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Entry
111578922 CDS
T06018
Symbol
hif1aa
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha a
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04137
Mitophagy - animal
aoce04140
Autophagy - animal
aoce04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
111578922 (hif1aa)
04137 Mitophagy - animal
111578922 (hif1aa)
04148 Efferocytosis
111578922 (hif1aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aoce03000
]
111578922 (hif1aa)
Transcription factors [BR:
aoce03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
111578922 (hif1aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
111578922
NCBI-ProteinID:
XP_023141678
Ensembl:
ENSAOCG00000007901
LinkDB
All DBs
Position
20:complement(14868160..14883067)
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AA seq
751 aa
AA seq
DB search
MDTGIVPEKKRVSSERRKEKSRDAARCRRGKESEVFYELAQQLPLPHSVSSSLDKASIMR
LTISYLRMRKLLCTDEPMAEEETELDVQLNSSYLKALEGFLMVLSEDGDMIYLSENVSKC
LGLAQFDLTGHSVFDFTHPCDQEELREMLVHRTGSKKAKEPNTERSFFLRMKCTLTSRGR
TVNVKSATWKVLHCSGHVRVYDNPTAQTTNGQKEPPVPYLVLICDPIPHPSNIEVPLDTK
TFLSRHTMDMKFTYCDERITELMGYDPEDLLNRSVYEYYHALDSDHLTKTHHNLFAKGQV
STGQYRMLAKKGGFVWVETQATVIYNSKNSQPQCVVCVNFVLSGIQEEKMILSLEQTEDV
KPVKEEQQQEDETIVLSSEPDLSPALPKEEEKGPELDVIKLFTQVVESKPLVSLYDQLKA
EPEALTLLAPAAGDTIIPLDFTCPDSEIQLLKDVPLYNDVMLPSTSDKLAMPLSPLPPSE
PLSVSSTASQDAKSAPLTTPRSHSSPEADSALDFCFPMDSEMNSDFKLDLVEKLFAIDTE
PKTPFNTQTMEDLDLEMLAPYIPMDDDFQLRSQTPEEPLSCGPIKSLGSSPLHVSQDIRT
FPGSPFSTPGSRTASPAPPEPINAPNLATISTKRTPHLDEDVSLRTLAAQNAQRKRKLCD
LKEIIGQGTLPSEQIDKSKKLKASESRTTRTILLLPSDLASRLLGSTSEGTSSPFTLPQL
TRYDCEVNAPLQGRQYLLQGEELLRALDHVN
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggacacaggaattgtacccgaaaagaaaagggtgagctcggagcggaggaaggaaaaa
tcaagggatgcagcacgatgccggcgtgggaaggagtcagaggtgttctacgagctggcc
cagcagctgcccctgccccacagtgtcagctccagcctggacaaggcctccatcatgagg
ctcaccatcagttacctgcgcatgagaaaactgctctgcacagatgagccaatggcagag
gaggaaacggagcttgatgtccagctaaacagctcttacctaaaggctttggagggcttt
ctcatggtgctgtctgaagacggagatatgatttatctctctgagaatgtcagcaagtgc
ctcgggctggcacagtttgacctgactggacacagtgtctttgacttcacacatccctgt
gaccaggaggagctgagggagatgctggtccacagaacaggctccaagaaagccaaggaa
ccaaatacagagcgcagcttctttctccgaatgaaatgcactctaacaagcaggggccgc
actgtgaatgtgaagtcagctacatggaaggtgcttcactgctcaggtcatgtgcgtgtt
tatgacaacccaacggcgcagaccaccaatgggcaaaaggagccacctgtcccctacctg
gttttgatctgcgaccccatcccacatccttccaacattgaggtccctctggacaccaag
acttttctcagccgccacacaatggacatgaagttcacatattgtgatgagaggatcact
gagctcatgggttatgatcctgaggacctcttgaaccgttctgtgtatgagtactatcat
gctctggactcggaccatcttaccaagactcaccacaacttatttgcaaagggccaggtc
agcacaggccagtaccggatgttggccaagaaaggaggctttgtatgggtggaaacacaa
gccactgtcatctacaacagcaagaactcccagccacagtgtgttgtctgtgtcaacttt
gtgctcagtggcatccaggaggagaaaatgatcctgtctctggagcagactgaggatgtg
aagccggtgaaggaggagcagcagcaggaagacgagactatagtcttgagcagcgagccc
gacctgtctccagctctacccaaggaggaggaaaaaggcccagagctggatgtcatcaaa
ctcttcacccaggtggttgagtccaagccgctggttagtctgtatgaccagctaaaggcg
gagccagaagccctcaccctactggccccagctgcaggagacacaatcatccctttggac
ttcacctgccctgattcagagatccagctgctgaaggatgttcctctctacaatgatgta
atgcttccctccacaagtgacaagctggctatgcctctttcccctctgccacccagcgag
cctctcagtgtctccagcacagcctctcaagatgcaaaatctgccccattgaccacacca
agaagtcacagctccccagaggctgatagcgcactggacttttgtttccccatggattca
gaaatgaactcagattttaaactagacttggtggagaagctgtttgccattgatacagaa
cccaaaacccccttcaacacacagacaatggaagacttggatctggagatgttagctccc
tacatccccatggacgatgacttccagctgcgcagccagactccagaagagcctctgtct
tgtggaccaatcaaatcccttgggagttctccactccacgtctcacaggacatccgcacc
tttcccggctccccgttcagcacaccaggcagtcgcacagcttccccagcaccaccagag
cctataaatgcccctaatcttgccaccataagcacaaagaggaccccacacctggatgaa
gacgtctcgctgaggacgctggcagctcagaacgcacaacgcaaaagaaaactgtgtgac
ctaaaggagataattggacagggaactttgccctcggagcaaattgacaagagcaaaaag
ctgaaggcttcagagtcaagaacgaccagaaccatacttctgctgccttcagatttggca
agtcgcctgcttggcagcacttcagagggcaccagttccccctttaccctgccacagctc
acccgctacgactgcgaggtgaatgcccccttacagggccggcagtacttgctgcagggg
gaggagctgctgcgtgctctggaccacgtcaactga
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