Amphiprion ocellaris (clown anemonefish): 111578940
Help
Entry
111578940 CDS
T06018
Symbol
mnat1
Name
(RefSeq) CDK-activating kinase assembly factor MAT1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03022
Basal transcription factors
aoce03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111578940 (mnat1)
09124 Replication and repair
03420 Nucleotide excision repair
111578940 (mnat1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aoce03021
]
111578940 (mnat1)
03400 DNA repair and recombination proteins [BR:
aoce03400
]
111578940 (mnat1)
Transcription machinery [BR:
aoce03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
111578940 (mnat1)
DNA repair and recombination proteins [BR:
aoce03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
111578940 (mnat1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-RING_UBOX
zf-C3HC4
TRAF3_RING
zf-UDP
zf-RING_2
zf-P11
Motif
Other DBs
NCBI-GeneID:
111578940
NCBI-ProteinID:
XP_023141713
Ensembl:
ENSAOCG00000007722
LinkDB
All DBs
Position
20:complement(14940816..14973540)
Genome browser
AA seq
311 aa
AA seq
DB search
MDDQGCPRCKTTKYRNPSLKLMVNVCGHTLCENCVEMLFVRGSGNCVQCDTPLRKSNFRV
QLFEDPTVDKEVEIRKKVLKIYNKRDFDFPSLREYNDYLEQVEDIVFNLTNNIDVENTKL
RMEQYQRENRDIIQKNKAKLTREQEELEELLLLEQQGNEQRRLEALQEEQRQLQAKKKNK
QALLDELEQSQLPATILLAQHKVRAAQLETQIEQQKQAVKPTNLFSTGIQMRQTVSLQPV
PRIEEVLYHYKPLQVETYGPRVPELEQLGRLGYLNHVRAAMPQDTAGGYTSALACYRAIQ
DAFSGLFPAKG
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggacgaccagggctgtccgagatgcaaaaccaccaaataccggaatccgtcgctgaag
ctgatggtgaacgtctgcggacacacgctatgcgagaactgtgtggagatgctgtttgtg
cgtggctcgggcaactgcgtgcagtgcgacacgcccctgcggaagagcaactttcgtgtg
cagctcttcgaagacccgactgtagacaaggaggtggagattcgcaagaaggtgctgaag
atttacaacaagagagattttgacttccccagcctgagagaatataacgattatctggag
caagtggaggacatagtgtttaacctgacaaacaacattgatgtggagaacaccaagctg
aggatggagcagtaccagagagagaacagagatatcatccagaagaataaggctaagctt
acgcgagagcaggaagagttggaggagctgctgttgctggagcaacagggcaatgagcaa
cggagactagaggcactgcaggaggagcaaagacaactacaagccaagaagaagaacaaa
caggcactgctggacgaactggagcagtctcagcttcctgccaccatcttacttgcccaa
cacaaggttcgtgctgctcagctggagacccagatagagcagcagaaacaggctgtgaag
cctaccaatctattttcaactggaatccaaatgcgtcagacggtgtctctccagcctgtg
cccaggatagaggaagttctgtaccactacaagccccttcaagttgaaacctatggaccc
cgagtgcctgaactggaacagctgggcagacttgggtatctgaaccacgtgcgggctgcc
atgcctcaggacacagctggaggatacacctcagctctggcgtgttatcgagccatccag
gatgctttcagtgggttgttccctgcaaaaggctga
DBGET
integrated database retrieval system
