KEGG   Amphiprion ocellaris (clown anemonefish): 111579027
Entry
111579027         CDS       T06018                                 
Symbol
sem1
Name
(RefSeq) 26S proteasome complex subunit SEM1
  KO
K10881  26 proteasome complex subunit DSS1
Organism
aoce  Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03050  Proteasome
aoce03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:aoce00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    111579027 (sem1)
  09124 Replication and repair
   03440 Homologous recombination
    111579027 (sem1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aoce03019]
    111579027 (sem1)
   04131 Membrane trafficking [BR:aoce04131]
    111579027 (sem1)
   03051 Proteasome [BR:aoce03051]
    111579027 (sem1)
   03400 DNA repair and recombination proteins [BR:aoce03400]
    111579027 (sem1)
Messenger RNA biogenesis [BR:aoce03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     111579027 (sem1)
Membrane trafficking [BR:aoce04131]
 Exocytosis
  Tethering complex
   Exocyst complex assembly proteins
    111579027 (sem1)
Proteasome [BR:aoce03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    non-ATPase subunits
     111579027 (sem1)
DNA repair and recombination proteins [BR:aoce03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     111579027 (sem1)
SSDB
Motif
Pfam: DSS1_SEM1
Other DBs
NCBI-GeneID: 111579027
NCBI-ProteinID: XP_023141856
LinkDB
Position
15:complement(12236904..12239403)
AA seq 70 aa
MSDKKQTVDLGLLEEDDEFEEFPAEDWTGLDEDEDAHVWEDNWDDDNVEDDFSNQLRAEL
EKHGYKMETS
NT seq 213 nt   +upstreamnt  +downstreamnt
atgtcagacaagaaacagaccgtagacctgggcttactggaggaggacgacgagtttgaa
gaattcccagccgaggattggacggggctggatgaagacgaagatgctcatgtttgggaa
gataactgggatgatgacaatgtagaggatgatttttcaaatcaactgagagcggagctc
gaaaaacatggttacaagatggagacgtcatag

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