Amphiprion ocellaris (clown anemonefish): 111579035
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Entry
111579035 CDS
T06018
Symbol
smarcd2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111579035 (smarcd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aoce03021
]
111579035 (smarcd2)
03036 Chromosome and associated proteins [BR:
aoce03036
]
111579035 (smarcd2)
Transcription machinery [BR:
aoce03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111579035 (smarcd2)
Chromosome and associated proteins [BR:
aoce03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
111579035 (smarcd2)
PBAF complex
111579035 (smarcd2)
GBAF(ncBAF) complex
111579035 (smarcd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
111579035
NCBI-ProteinID:
XP_023141865
Ensembl:
ENSAOCG00000000162
LinkDB
All DBs
Position
18:26994598..27004585
Genome browser
AA seq
502 aa
AA seq
DB search
MASRGSFTGPPMNPSVSPMNVGHAAGMRMPGMPQPPAGYPRSMNTTPQYPSRPGMPPSRV
GGPMGSMGGQLPGPSYGGGNIPMRPGMGHPSMDASRKRFLHQQHQQQQEALGGLRRGPKR
RKMADKVLPQRIRDLVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPIMQKRKLRIY
ISNTYTPSKPEGEEAEKVSSWELRVEGKLLEEPGKQKRKFSSFFKSLVIELDKELYGPDN
HLVEWHRMPTTQETDGFQVKRPGDVNVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQTRA
SIMQALWLYIKNNKLQDSHEKEYINCNRYFRQIFGCPRMRFSEIPMKLAGLLQHPDPIII
NHIISVDPTDQKKTACYDIDVEVDDPLKGQMNSFLSSTTNQQEIAALEMKIHETIEYINQ
LKTERDFMLSFSNNPQEFIQDWLKSQSRDLKLMTDVTGNPEEERRTEFYQAPWVPEAVGR
YIYSKVQQRRQELEQVLGIRLT
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaagaggaagcttcacgggtcctccgatgaatcccagtgtgagccccatgaac
gtcgggcacgctgcgggcatgaggatgccaggaatgccgcaacctccggctggttacccc
cggagcatgaacaccacaccccaatacccctcgcgtccagggatgccacccagtagagtg
gggggccccatggggtcaatggggggtcagctgccaggcccctcctatggtggcggtaac
attcccatgaggccaggcatgggacacccgagcatggacgcctcaaggaagcgctttctt
catcagcagcatcaacaacagcaagaggcgctgggaggcctcagacgaggaccaaaaaga
cgcaagatggctgacaaggttctgccacagaggatccgtgacctggtcccagagtcccag
gcctacatggacctgctggcctttgagaggaagctggatcaaaccatcgccagaaagcgt
atggagattcaggaggccatcaagaagcctattatgcaaaagcgcaagctcaggatctac
atttccaacacttacactcccagcaagcctgagggtgaggaggcggagaaggtgtcctcc
tgggaactgagagtggaaggcaaactcctggaggaaccgggcaagcagaagaggaagttc
tcatctttcttcaaaagcctggtgattgagctcgataaggagctctatggacctgacaat
cacttagtagagtggcacagaatgcccaccactcaggagacagatggtttccaagtgaaa
aggcccggtgacgtgaatgtgaaatgcacccttctgctcatgctcgatcaccagccccct
cagtacaaactggacccacgactggctcgccttctgggtgtgcacacacagacacgagcc
agcatcatgcaagctctctggctctacatcaagaacaacaagctgcaggacagtcacgag
aaggagtacatcaattgcaaccgctatttcagacagatcttcggctgtccacgaatgagg
ttctctgagattcccatgaagctggcgggcctgctgcagcaccctgatcccattattatc
aatcacatcattagtgtggatcccacagatcagaaaaagacagcatgttatgacatcgat
gtggaggtggacgacccactgaaaggccagatgaacagctttctgtcctctacaaccaac
caacaggaaattgctgcacttgagatgaagattcatgaaaccatcgagtacattaaccag
ctgaagactgagagagacttcatgctgagcttcagcaataatccacaagagttcatccag
gactggctgaagtctcagagcagagatctgaagttgatgacagatgtgactggaaaccca
gaagaagagaggaggactgagttctaccaggcaccgtgggtcccagaggcagtgggacga
tacatttattcaaaggtgcagcagagaagacaagagttggagcaagtgttgggtatccga
ctcacctaa
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integrated database retrieval system
