Amphiprion ocellaris (clown anemonefish): 111579051
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Entry
111579051 CDS
T06018
Symbol
vti1a
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1A isoform X1
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
111579051 (vti1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aoce04131
]
111579051 (vti1a)
Membrane trafficking [BR:
aoce04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
111579051 (vti1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Mer2
Sec20
Laminin_II
Sec8_N
CAP59_mtransfer
DUF1664
DUF5344
Motif
Other DBs
NCBI-GeneID:
111579051
NCBI-ProteinID:
XP_023141912
Ensembl:
ENSAOCG00000030429
LinkDB
All DBs
Position
18:complement(29491180..29611984)
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AA seq
224 aa
AA seq
DB search
MSSDFEAYEQDFGTITADITNKIGRIPKLSGEEKTQLVLNVDKQLEEVRELLEQMDLEVR
EIPIQSRAMYNSRLKSYKQEMEKLEKDFKRSRIAYSDEVRNELLGDDAGSSENQLIKLRE
ERAHLLDNTEKLERSSRRLEAGYQIAVETEQVGQEILANLHTDREKIQRARERLRETDAN
LGKSSRILTGMLRRIIQNRILVFILGAIILLTIILAIYFNLRGH
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagactttgaggcttacgagcaggactttgggaccattacagcggacataact
aataaaattggcagaattcccaagttaagtggagaggagaagacacagctggttctaaat
gtcgacaaacagcttgaagaagtcagagagttgctggagcagatggacctggaagtgcga
gagattcccatccagagccgagccatgtacaacagcagactgaagagctacaagcaggag
atggagaagctcgagaaagactttaaaaggtcacgtattgcctacagtgatgaggtgcgc
aacgagctcctgggggatgacgccggctcctcggagaaccagttgataaagttacgtgaa
gagagagcgcatctgttggacaacacagagaagctggaaaggtcatcacggagactggag
gccggctaccagatagcagtagaaactgaacaagtgggacaggagattcttgccaacctg
cacaccgatcgtgagaagatccagagagccagagaaaggctgagagaaacagacgccaac
ctgggcaagagttctcgcatccttaccggcatgctgagaaggatcatccagaaccgcatc
ctggtcttcatcctcggagccatcatcctcctcaccatcatcctggccatctatttcaat
ctgcgaggccactga
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