Amphiprion ocellaris (clown anemonefish): 111579063
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Entry
111579063 CDS
T06018
Name
(RefSeq) probable histone deacetylase 1-B
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03082
ATP-dependent chromatin remodeling
aoce03083
Polycomb repressive complex
aoce04110
Cell cycle
aoce04330
Notch signaling pathway
aoce04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111579063
03083 Polycomb repressive complex
111579063
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
111579063
04350 TGF-beta signaling pathway
111579063
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
111579063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aoce03036
]
111579063
Enzymes [BR:
aoce01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
111579063
Chromosome and associated proteins [BR:
aoce03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
111579063
HDAC complexes
Sin3A-HDAC complex
111579063
BRAF-HDAC complex
111579063
REST complex
111579063
SHIP complex
111579063
MiDAC complex
111579063
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
111579063
Heterochromatin formation proteins
Other heterochromatin formation proteins
111579063
Chromatin remodeling factors
NuRD complex
111579063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Glypican
Motif
Other DBs
NCBI-GeneID:
111579063
NCBI-ProteinID:
XP_023141935
Ensembl:
ENSAOCG00000024312
UniProt:
A0A3Q1C1G8
LinkDB
All DBs
Position
15:17320830..17329674
Genome browser
AA seq
482 aa
AA seq
DB search
MALSQGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAS
GEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAG
AVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAI
FKPIMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYIKSFNLPLLMLGG
GGYTIRNVARCWTYETAVALDCSIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLE
KIKQRLFENLRMLPHAPGVQIQAIPEDAPHPDSGDEDEEDPDKRVSIRAHDKRIACEEEF
SDSEDEAEGQGGGRRNAANHKKAKRVKKEEEKEVEEKKEVKEEEKEEEKMDTSGPKEEVK
TT
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgtctcaaggaacaaagaaaaaagtttgctattactatgacggtgatgtggga
aattactactatggccagggccaccctatgaaaccccacaggatccgcatgacacacaac
ctcctcctcaactatggactatacaggaaaatggagatctatagaccacacaaagccagt
ggtgaagagatgacaaaataccacagtgacgactacattaagttcctgaggtccatccga
ccagacaacatgtctgagtacagcaaacaaatgcagagatttaatgtcggagaggactgt
ccagtgtttgatggtctgtttgagttttgccagctctcaacaggtggctctgtggctgga
gctgtgaagctgaacaagcagcaaaccgacattgccatcaactgggctggtggactccat
cacgccaagaagtctgaagcctctggtttctgctacgtcaatgacatcgtcttggctatc
ctagagctgctcaaataccaccagagggtgttgtacatagacattgacatccaccatggt
gatggtgtggaggaggccttctacaccacggacagggtcatgaccgtttcattccacaag
tatggggagtacttccctggcactggagacctgagggatataggtgcaggaaagggcaag
tactatgctgtaaactaccctcttagagacggcattgatgatgagtcttatgaagccatc
ttcaagcctatcatggctaaagtcatggagatgtaccagccaagtgctgtggttctccag
tgtggagccgattcactttctggagacagactgggctgcttcaacctcaccattaaaggt
catgccaagtgtgttgagtacatcaaaagtttcaacctccctctgctgatgctgggtggt
ggaggctacactattcgcaacgtggcccgttgctggacctacgaaactgctgttgccctg
gattgctcaatccccaatgagttaccctacaacgattactttgaatactttgggcctgat
ttcaagctccacatcagcccctccaacatgaccaaccagaacaccaacgagtacttggag
aagatcaaacagcgtctgtttgaaaacctccgtatgctgcctcacgcccccggtgtccag
atacaggcgatcccagaggacgctcctcacccagacagtggagacgaggatgaggaagac
ccagacaaacgtgtctctatccgggcccatgacaagaggatagcctgtgaggaggagttt
tcagattctgaggatgaggccgaagggcagggtggaggacgcagaaatgcagccaaccac
aaaaaggcaaaacgagtgaagaaggaagaagagaaggaagtagaggagaagaaagaagtg
aaagaggaagagaaggaggaagagaagatggatacatcaggaccaaaagaagaggtgaag
acaacttga
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