KEGG   Amphiprion ocellaris (clown anemonefish): 111579103
Entry
111579103         CDS       T06018                                 
Symbol
rbm8a
Name
(RefSeq) RNA-binding protein 8A
  KO
K12876  RNA-binding protein 8A
Organism
aoce  Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03013  Nucleocytoplasmic transport
aoce03015  mRNA surveillance pathway
aoce03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aoce00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111579103 (rbm8a)
  09122 Translation
   03013 Nucleocytoplasmic transport
    111579103 (rbm8a)
   03015 mRNA surveillance pathway
    111579103 (rbm8a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aoce03019]
    111579103 (rbm8a)
   03041 Spliceosome [BR:aoce03041]
    111579103 (rbm8a)
Messenger RNA biogenesis [BR:aoce03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     111579103 (rbm8a)
Spliceosome [BR:aoce03041]
 Complex C
  Other components
   EJC/TREX
    111579103 (rbm8a)
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5 RRM_7
Other DBs
NCBI-GeneID: 111579103
NCBI-ProteinID: XP_023141998
Ensembl: ENSAOCG00000023887
LinkDB
Position
9:complement(13388561..13394664)
AA seq 175 aa
MADVLDLHEAGGEDFPMDEDGDESIHKLKEKAKKRKGRGFGSEEGARSRTKEDYDTVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFSEFGEIKNLHLNLDRRTGYLKGYALVE
YETYKEAQAAMEGLNGQDLMGQPISVDWGFVRGPPKNKRRAGGRRRSRSPDRRRR
NT seq 528 nt   +upstreamnt  +downstreamnt
atggcggacgtgttggaccttcacgaagcgggaggcgaggactttcctatggatgaagat
ggtgatgagagcatccacaagctgaaggagaaagccaagaagaggaaaggacgaggcttt
ggttcagaggagggagccaggtccagaaccaaagaggactatgatacagtggaacaagat
ggggatgagccaggacctcagaggtctgtcgagggatggatcctgtttgtgacaggagta
catgaggaggccacagaggaagacatccatgacaagttctcagagtttggagaaatcaag
aatctgcatctcaaccttgatcgtagaacaggctacctcaagggctatgcactggtggag
tatgagacatacaaagaagcccaggcagccatggaagggcttaatggtcaggacctgatg
ggtcagcctataagtgtagactggggatttgtcagagggccccccaagaacaagagaagg
gctggtggccggagacgcagcagaagtccagacaggaggcggcgttga

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