Amphiprion ocellaris (clown anemonefish): 111579337
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Entry
111579337 CDS
T06018
Symbol
nr1d2a
Name
(RefSeq) nuclear receptor subfamily 1 group D member 2a
KO
K08531
nuclear receptor subfamily 1 group D member 2
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aoce03000
]
111579337 (nr1d2a)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
aoce03310
]
111579337 (nr1d2a)
Transcription factors [BR:
aoce03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
111579337 (nr1d2a)
Nuclear receptors [BR:
aoce03310
]
1. Thyroid hormone like
1D. Rev-Erb
111579337 (nr1d2a)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
111579337
NCBI-ProteinID:
XP_023142360
Ensembl:
ENSAOCG00000015900
UniProt:
A0A3Q1CNS0
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Position
9:14571083..14577718
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AA seq
600 aa
AA seq
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MSEDVGTAKPGGVIAYISSGSASTPESCLSSSPSSGYLSTSPTVSRPSLPSRAVGMVVDI
APPAKSGHSRSNGTEKAGRSSTSAKSSITKINGMVLLCKVCGDVASGFHYGVHACEGCKG
FFRRSIQQNIQYKKCLKMENCTIMRINRNRCQQCRFKKCLAVGMSRDAVRFGRIPKREKQ
RMLLEMQNAMNNMMSSNSQLHSMLHGHQSPALPMEAMSSDASSSPSSSSSSASDSPSCSN
PSSPQCPQDSESVVSMDTNSSSASSCADSSEDEAVITVSRQHQDAFTFSQQRSPRQGQAS
PSPATVDSGTGCDNRMEEQQENWNCWNNNVATGGYQHSSYSSNQHITNSAYREEREVCQQ
QLNSAPSCEPSECSQRQHELNRQAASSGYNGPSSCVNSRAHLVCPMNTSPYVDPRKPSQE
IWEEFSMSFTPAVREVVEFAKRIPGFRDLPEHDQVSLLKAGTFEVLMVRFASLFNVAERT
VTFLSGKRYSLDTLRSLGAGELLNSMCEFSEKLAALRLDSDEMSLFTAVVLVSADRSGIQ
DLNSVEALQDKLIRALRNLVMQNHGDESATTFTKLLLKLPELRSLNNMHSEELLSFKVHP
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaggacgttgggacagccaagcccggaggagtcatagcctacatctcctccggc
tctgcctccaccccagagtcctgtttgagcagcagccccagcagcggctacctgtcgaca
tcaccgactgtgtcccgcccctcgctgcccagccgggctgtgggcatggtggtggatatc
gctccgcctgccaagagtggccactcccgcagcaacggaacggagaaggccggccgatcc
tccacatctgccaagagcagcatcacgaaaatcaacggcatggtgctgttgtgcaaggtg
tgtggtgacgtggcctcgggcttccattacggtgtccacgcttgtgaaggctgcaagggc
ttcttcaggagaagcatccagcaaaacatccaatataagaagtgtcttaagatggagaac
tgcaccatcatgagaatcaacagaaaccgctgtcagcagtgtcggttcaagaagtgtctg
gcagttggcatgtccagagatgctgttagatttggtcgcatcccaaaaagggaaaaacag
aggatgctgttggagatgcagaacgccatgaacaacatgatgagcagcaacagccagctg
cacagcatgctgcacggccaccagagccccgctcttcccatggaagccatgagcagcgat
gccagctcgtctccatcctcttcctcctcctctgcttccgactctccatcgtgttccaac
ccctcctccccgcagtgtccccaggactcagagtctgtggtttccatggacaccaactcc
agctcggcctcctcctgtgcagacagcagcgaggatgaggctgtcatcacagtgagcagg
cagcaccaggatgccttcacattcagccagcagagatcaccaaggcaaggccaggcctcg
ccctcaccggccacagtcgactcgggaaccgggtgtgacaaccgcatggaggagcaacag
gagaactggaactgctggaataacaatgtggccacgggaggttaccagcacagctcttac
agcagtaaccaacatattaccaactctgcttatcgggaggagagggaagtttgccagcag
cagctcaacagcgcccctagctgtgaaccatcagaatgcagccaaagacaacatgaattg
aacagacaagctgcctcaagtggttataacggaccaagcagctgtgtgaacagtagagcc
catctggtctgcccgatgaacacgtcgccatatgtggacccccgcaagcccagccaggag
atctgggaggagttttccatgagcttcaccccagctgtacgagaggtggtcgagttcgcg
aagaggatcccgggcttccgtgacctccccgagcacgaccaagtgagcctgctgaaagct
ggaactttcgaggtgctgatggtccgatttgcctctctgttcaacgtggctgagcggacg
gtgaccttcctgagtgggaagcgctacagcctcgacacactgcgctcgctgggcgctggt
gagctgctcaactccatgtgcgagttcagcgagaagctggcggctctgcggctcgattca
gatgaaatgagccttttcaccgccgtggtgctcgtctcagccgatcgctcagggatccag
gacctgaactccgtggaggctctgcaggacaaactgatccgggcgctgcgaaacctggtg
atgcagaaccacggcgacgagtccgccaccacgttcaccaagctgctgctcaaacttccc
gagctgcgttcactcaacaacatgcattcagaggaactgctctcgttcaaagtgcaccct
tga
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