KEGG   Amphiprion ocellaris (clown anemonefish): 111579517
Entry
111579517         CDS       T06018                                 
Symbol
smu1b
Name
(RefSeq) WD40 repeat-containing protein SMU1 isoform X1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
aoce  Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:aoce00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aoce03041]
    111579517 (smu1b)
Spliceosome [BR:aoce03041]
 Complex B
  Other components
   Complex B specific factors
    111579517 (smu1b)
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_EML EIF3I Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th WD40_MABP1-WDR62_1st LisH_TPL NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_HPS5 Beta-prop_TEP1_C Beta-prop_NWD2_C Beta-prop_Nup120_160 Ge1_WD40 Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_NUP159_NUP214 Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_WDR35_TULP_N Beta-prop_VPS8 Beta-prop_IP5PC_F Beta-prop_BBS7 TFIIIC_delta Mala_s_1-like DUF7165 VPS8_N PD40 WDR54 LisH
Other DBs
NCBI-GeneID: 111579517
NCBI-ProteinID: XP_023142583
Ensembl: ENSAOCG00000010141
LinkDB
Position
4:complement(18515213..18528305)
AA seq 512 aa
MAVDMEPSDVIRLIMQYLKENNLYRTLTTLQEETTVSLNTVESIDSFIADINRGHWDSVL
LAIESLKLPDNTLIDLYEQVVMELIEMREVGAARSLLRQTDPMIMLKQTQPERFSHLENL
LTCSYFDPREAYPKGSSKEKRRRAIAEALVREVSVVPPSRLMGLLEQVGSLRLQQYPGHL
SPDMAIETSNNNKGRQVEKESFPTQLYRHIKFGRRSHVECARFSPDGKYLVTGSVDGFIE
VWNFYTGKISKELKYQAQDSFMMMDDAVLCMCFSQDADLLATGAQNGKIKVWKIQSGLCL
RRFEHAHSKGVTCLSFSKDSSQILSASFDQTIRIHELRSGKTLKELNGHSSFVNDASFTQ
DGCHIISASSDGTVKIWNTKSCECIHTFKSLSRTSDVPVNNVLPLPQNPEHFVVCNHSNT
VVVLSMHGQTVKTFSSNRKESTDFVCCTLSPRGEWIYCVGEDLVLYCFNYTTGRLEKTLT
VHEKDVIGIAHHPHENLIATYSEDGLLRLWKP
NT seq 1539 nt   +upstreamnt  +downstreamnt
atggctgtggacatggagccctccgatgtgatccgcctgataatgcagtacctgaaggag
aacaacctctaccgaacgctgaccaccttacaagaggaaaccaccgtctcgctcaacacg
gtggagagcatcgacagcttcatcgcagatataaacaggggccactgggactccgtgctg
ttggccatcgagtccctcaagttgcccgacaacacgctcattgacctttatgagcaggtt
gtgatggagctcattgagatgcgtgaggtgggcgcagctcgttctctcctcagacaaact
gaccccatgatcatgctgaagcagacgcagccggagaggttcagccatctggagaacctg
ctgacatgctcctactttgaccctcgtgaggcgtatcctaaaggcagcagcaaggagaaa
cgccgccgagccatagccgaggctctggtgagggaggtcagcgtggtgcctccttctcgc
ctcatggggctcctggaacaagtcgggtcgttgagactgcagcagtatccaggacatctc
tcccctgacatggccatagaaacatctaacaacaacaaggggagacaagtggagaaagag
agctttccaacgcagctgtaccgccacatcaagtttggacgacggtcacatgtggaatgt
gcccgtttctcacctgatggaaagtatttggtgaccgggtcagtggacgggttcattgag
gtctggaacttctacactggaaaaattagcaaggagttaaagtatcaggcccaggacagc
ttcatgatgatggatgacgctgtgctgtgtatgtgcttcagtcaggatgcagacctgctg
gccaccggagctcagaatggcaaaataaaggtgtggaagatccagagtggcttgtgcctg
cgcaggtttgagcacgctcacagcaaaggcgtgacttgtctgagcttctccaaggacagc
agccagatcctcagcgcttcctttgaccagaccatcagaatccatgaactgaggtcaggc
aagacactaaaggagttaaatggccactcatcatttgtaaatgatgcgtctttcactcaa
gacggatgccacattatcagcgcctcatccgacggcacagtcaagatttggaacacaaaa
tcctgcgagtgcatccacaccttcaagtctctgtcaaggacatcagatgtccccgtcaat
aatgtgctccctctgccccaaaacccagagcactttgtggtttgtaaccactcaaacaca
gtggtggtcctgagcatgcacggccagactgtgaagaccttcagctcaaacagaaaggaa
agcacagactttgtgtgttgcaccctgtcaccccgcggggagtggatttactgtgtggga
gaggacttagtgctgtactgcttcaactatacgacaggaaggctggagaaaacgctgact
gttcacgagaaagatgtaattggcatcgctcaccacccacatgagaatctgatcgccaca
tacagcgaggacggcctgctgaggctatggaaaccttaa

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