Amphiprion ocellaris (clown anemonefish): 111579892
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Entry
111579892 CDS
T06018
Symbol
ptchd4
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
aoce04990
]
111579892 (ptchd4)
Domain-containing proteins not elsewhere classified [BR:
aoce04990
]
Other domain-containing proteins
Patched domain-containing proteins
111579892 (ptchd4)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
DUF7041
Motif
Other DBs
NCBI-GeneID:
111579892
NCBI-ProteinID:
XP_035811843
Ensembl:
ENSAOCG00000022599
LinkDB
All DBs
Position
12:complement(21822788..21885462)
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AA seq
925 aa
AA seq
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MCFIGGHGASASWILWRMLRQVIHRGLKASFYWLGLFVSRHPVFFLTVPAVLTIIFGSTV
LSRFKPETNLEVLVAPTHSLAKIERSLANSLFPIDQSKHKLYSDLHTPGRYGRLILLAKS
GGNILELADQVLQVHKQVLDLRVNYKGFNYTFAHLCVLSHRDKRCLLDDIITIFEDIRQA
VLSNSTFHKVPVSYPNTTLKDGRVSFIGHQLGGVSFSPNSRDQQVKFARAVQITYYLRNH
GPPVQDAIAERWENEFCALVSRLSTFEAPQAPDQLHIQSLTSFSLWRDFHQTGVLAKGEV
LVSLVLVLLAATISSSMRDCLRGKPFLGLLGVLTICIANVTAAGIFFISDGKFNSTLLGI
PFFAMGHGTKGVFELLAGWRRTRENLPFKERVADAFADVMVCYTMTSSLYIITFGMGASP
FTNIESVKIFCQSMCVAILVNYFYVFSFYGSCLVFAGQLEQNRYHSVFCCKIPSVEYLDR
QPTWFKTMMSDGHDLSTHHDSVPYQNHFIQHFLREHYTEWITNTYVKPFVVILYLIYASF
SFMGCLQISDGSNIVNLLASNSPSVSYALTQQKYFSNYSPVIGFYIYEPIEYWNSTVQEH
LKTLSHGFNKISWMDNFFHYLRVVNVSASTKSDFITILKGSFLRSPEYQHFTEDIIFSKN
RETDEYDIIASRMYLVARTTEKKREEVVELLEKLRPLMLINSIKFIAFNPTFVFMDRYSS
SVISPILTSGFSVLTILILTFFLVINPLGNFWLILTVTSVELGVLGLMTLWNVGMDSISI
LCLIYTLNFAMDHCAPHLYTFVLATEHTRTQCIKLALEEHGAAILQNTSCFVIGIMPLVF
VPSNLTYTLFKCSLLTAGCTVLHCFVILPVFLTFFPPSKKRHKKKKRAKRKERERERERE
REREREREEIECIEVRENPDHVTNV
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgtgcttcatcggaggacacggggcatctgcaagctggattttgtggaggatgctgcgg
caagtgatacacagagggctcaaggcttcgttctactggctgggcttattcgttagcaga
caccccgttttcttcctcaccgtccccgccgtcctcaccatcattttcggatctaccgtg
ctgagccgattcaagccggagacgaacctggaggtgctggtcgccccgacgcacagcctc
gccaagatcgagcggagtctcgccaacagcctgtttcccatcgaccagtcgaagcacaag
ctgtactcggatttgcacaccccgggcagatatggcaggctgatcctactggccaagtcc
ggggggaacatcctggaactggccgaccaggtcctgcaggtccacaagcaggtgctggac
ctgcgcgtcaattataagggattcaattacacgttcgcgcacctctgcgtcttgagccac
agggacaaacgctgcctcttggatgatatcatcaccatcttcgaagacatcaggcaggct
gtgctctccaacagcactttccataaggtgcccgtgagctatccaaacacaacgttaaag
gatggtcgtgtgtccttcatcggacaccagctgggcggcgtgtccttctcacccaacagc
cgcgaccagcaggtcaagttcgcccgcgctgtccagatcacgtactatctccgtaatcac
ggaccaccggtgcaggatgccatcgcagagcgctgggagaatgagttctgcgccctggtc
agccggctgtccacgttcgaggcgccccaagcacctgaccagctccacatccagtccctc
acctccttcagcctgtggcgggacttccaccagacgggcgtgttggccaagggggaggtg
ctggtcagcctggtgctggtgctcttggccgccaccatctccagttccatgcgggactgt
ctgagggggaagccgttcctgggccttctgggcgtgttgaccatttgcatcgccaatgtg
acggccgccgggatcttcttcatatcggacgggaagttcaactccacgctgctggggatc
ccgttcttcgccatgggccatggaaccaaaggagtgttcgagctgctggcaggctggagg
agaacgagggaaaacctacctttcaaggaacgtgtggctgatgctttcgctgacgtgatg
gtttgctacaccatgaccagctcactctacatcatcacatttggcatgggagccagccct
tttaccaacatcgagtcggtgaaaatcttctgccaaagcatgtgcgtggccatcctggtc
aactacttctacgtgttctcgttctacggctcctgcctggtgtttgccggacagctagaa
cagaatcgctaccacagtgttttctgttgtaagatcccctcagtggagtacctggaccgc
cagcccacgtggtttaaaactatgatgagcgatggccatgacctgtccacacaccatgac
agcgtcccgtaccagaaccacttcatccagcactttctccgagagcactacacagaatgg
attaccaacacctatgtcaaaccctttgtggtcattctttatctcatctatgcctcgttc
tcattcatgggatgtttacaaatcagtgacggatcgaatatcgtgaacctgctggctagt
aactctccgagtgtttcatatgctttgacccagcagaaatacttcagtaactacagtcct
gtgattggcttttatatatatgagcccattgagtactggaactccacggtgcaggagcat
ctgaagactctgagtcatggcttcaacaagatctcctggatggacaacttcttccactac
ctgcgagtagtgaatgtgagcgcttcgactaaaagcgacttcatcaccatccttaagggt
tccttcctgcgcagtccagagtaccagcacttcactgaggacatcatattctccaagaac
cgtgagactgatgagtacgacattatcgcctcacggatgtacttggtagcacggaccaca
gagaagaagcgcgaggaggtggtggagcttttagaaaagcttcgtccattgatgctgatc
aacagcatcaaattcattgccttcaatcccacatttgtgttcatggaccgctacagctcc
tccgtcatctctcccatcctgacctcaggcttcagcgtgctcaccatcctcatcctcact
ttcttcctggtcatcaaccccttgggaaacttctggctcatcctcacggttacatccgtg
gagctgggcgtcttgggtttgatgaccctttggaacgttggcatggacagcatctcaatc
ctgtgccttatttatacccttaacttcgccatggatcactgtgcaccacacctgtacact
tttgtgctggccaccgagcacactaggacgcagtgcatcaagttggcactggaggagcac
ggggcggctatcctgcagaacacatcctgctttgtgattgggatcatgcccctggtgttt
gtgccttccaatctgacctacacactgttcaagtgctccctcctcacggcgggctgcacc
gtgctgcactgcttcgtcattctgcccgtcttcctgaccttcttcccgccgtccaaaaag
agacacaagaaaaagaaacgagccaagcggaaagagcgggaaagggaaagggagcgggaa
agagagagggaaagagaaagggaggagatagagtgcattgaagtcagggagaatcctgat
catgtgacaaatgtctga
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