Amphiprion ocellaris (clown anemonefish): 111579939
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Entry
111579939 CDS
T06018
Symbol
cdh4
Name
(RefSeq) cadherin-4 isoform X2
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04514
Cell adhesion molecule (CAM) interaction
aoce04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
111579939 (cdh4)
04519 Cadherin signaling
111579939 (cdh4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
aoce04515
]
111579939 (cdh4)
Cell adhesion molecules [BR:
aoce04515
]
Cadherins
Major cadherins
111579939 (cdh4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_FAT4_N
Ig_CLSTN
F59B103_C
NCMAP
Stevor
DUF5527
Motif
Other DBs
NCBI-GeneID:
111579939
NCBI-ProteinID:
XP_023143245
Ensembl:
ENSAOCG00000009381
LinkDB
All DBs
Position
5
Genome browser
AA seq
925 aa
AA seq
DB search
MNAGCVILACTLLAGASSGSKAGQPLKPPCRPGFSHNFYTVIVSRDVLHGQSILKDTSLS
SERVKFEDCQRSREVGFFSSDPNFGVRPDGTVYAEQEVANLSEPVQFMVTARGLHDPHIW
ETTVKLALAGHPHPLPLTKIGIEEMLSRVWESQPRIIKFPRKHQRGSSSNGLRRQKRDWV
IPPINVPENSRGPFPHMLVRIRSDQDKDVGIRYSITGAGADQPPSGIYNIDPISGNMFVT
QPLDREERASFHLRAHAVDMNGNQVENPIDLYIYVIDMNDNRPEFQNQVYNGSVAEGSKP
GSSVMQVTATDSDDSTTANGMVRYRILSQTPHSPIPNMFTINSETGDIVTVAAGLDREKV
SQYTIIVQATDMEGNLNFGLSNTATALISITDINDNPPELTVRTFSGEVPENKVNVVVTN
LTVVDRDQPHSPNWNAVYRIVSGDPSGHFTIRTNPITNEGMLTVVKPVDFEMNRAFMLTV
VVSNQAHLASGIQSSLQSTAGVTISVQDVNEPPVFPVNPKMIRFEEGVPAGTTLTVFAAQ
DPDHFVHQSVRYSKLSDPANWLKINRTNGQITTMALLDRESMYVKNNVYEATFLAFDSGS
PQASGTGTLQIYLIDVNDNAPVLIPREAQVCERARPNSKVNITASDADADPNVGPFVFEL
PSFPASVRRNWTISRLSGDYAQLRLRIPYLEAGVYEIPIIVSDSGNPPLTNRSVIRVKVC
PCDDNGDCSATGAVAAAGLGTGAIIAILICIIILLSMVLLFVVWMKRREKERQAKPLLID
PEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPESLEHIINKPSGVRRVDERPVIAESQYP
VRPSLPHPGDIGDFINDGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSSLNSTSSGDQ
DYDYLNDWGPRFKKLADLYGGGDDD
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctggctgcgtcatcttggcgtgcaccttacttgcgggcgcatcctcggggagt
aaggcaggccagcccctcaaacccccatgcagaccaggcttctcccacaacttctacacg
gtgattgtctccagagacgtgctgcacggccagagtattctcaaagataccagcctgtcc
agcgaacgtgtgaagtttgaggactgccagcgcagcagagaggtgggctttttcagcagt
gaccccaacttcggcgtgaggcctgatgggacggtgtacgcagagcaggaggtggccaac
ctgtcagagccggtccagttcatggtaacagcccgggggctccacgacccccacatctgg
gagaccacggttaaactggccctcgctggacatcctcatcctttaccactcacaaagatt
ggtattgaagaaatgctgtcaagagtctgggagtcccaaccccgaattatcaagtttccc
cgaaaacatcagaggggctcctcttccaatgggctcaggcgacagaagagagactgggtc
attccacctatcaatgtacctgaaaactccagaggacccttccctcacatgcttgtcaga
atccgctcagatcaggataaggatgttggcatccgctacagcatcaccggagcaggcgct
gatcagcccccgagtggtatctacaacatagatcccatcagcggcaacatgtttgtcacc
caacccctggacagagaggagagagcctccttccatctgcgcgcccacgcagtggacatg
aacgggaaccaggtggagaatccgatcgatctgtacatctacgtgatcgacatgaacgac
aacaggcctgagtttcagaaccaggtgtacaacggctctgtggccgaaggctccaaacca
ggctcatctgtgatgcaggtgacagccacagactcggacgactccaccacagcgaacggc
atggtgcgctatcgcatcctctcgcagacgccccacagccccatccccaacatgttcacc
atcaacagcgagactggagacatagttacagtggcagccggcctggacagagagaaagtg
tctcagtacaccatcattgtccaggccaccgacatggagggaaacctgaactttggactc
tccaacacagctacagccctcatttctatcaccgacatcaacgataatcctccagagctg
acagtcaggacgttttctggggaagtgccagagaacaaggtgaacgtggtggtgaccaac
ctgacggtggtggacagagatcagccccacagccccaactggaacgccgtctaccgcatc
gtcagcggagacccgtctggacacttcaccatccggactaaccccatcacgaacgaaggc
atgctgacagtggtcaagccagtggattttgagatgaatcgagccttcatgctgaccgtg
gtggtgtccaaccaggcccacctggccagcggcatccagtcctcactgcagtccacggcg
ggtgtcaccatctccgttcaggacgtgaacgagccacccgtcttccccgtaaaccccaag
atgatccgctttgaggaaggtgtgccagcagggaccactcttacagtgtttgctgcacag
gaccccgatcacttcgtccaccagagtgtcaggtactcgaagttatcagatccagcaaac
tggctaaagatcaacaggactaatggtcagatcaccaccatggccctgctcgaccgagag
tccatgtatgtgaaaaacaacgtgtacgaggccacattcctggcattcgactctggctcc
cctcaagccagcgggactggaaccctccagatatacctgatcgacgtgaacgacaatgcg
ccggtgctgattccccgcgaggctcaagtgtgcgagcgtgcgcgtcccaactccaaggtc
aacatcacagcttcggatgccgatgccgaccccaacgtggggccgtttgtctttgagctg
ccttcctttcccgccagcgttcgtcgcaactggaccatttccagactgagcggtgattat
gctcagctgaggttaaggattccttacctggaggcaggagtgtacgagattcccatcatc
gtgtcagactcgggaaatcctccgctgacaaatcgctccgtgatcagggtcaaagtgtgt
ccctgtgatgacaatggcgactgtagcgccacaggagccgtggcagccgccggcctcggt
accggggccatcatcgctatactcatctgcatcatcatactactcagcatggttctgctg
tttgtggtgtggatgaagcgcagggagaaggagcggcaggcgaagccccttctgatcgac
cctgaggacgacgtcagagacaacatcctgaagtatgatgaggagggaggaggagaggag
gaccaggactacgacttgagccagctgcagcagcccgagtccctcgaacacatcatcaat
aagccgtcgggggtgcgcagggtggatgagaggcctgtgattgcagagtcgcagtaccca
gtcagacccagcctgccccaccccggagacataggagacttcataaatgatggtctgagg
gcagcagacaacgaccccaccgctcctccctacgactccctgctggtgttcgactacgaa
ggcagcggatcgaccgccggctctgtcagctcactcaactccacgagctcaggagaccag
gactatgactacctcaacgactggggccctcgcttcaagaagctggccgacctctacgga
ggaggggacgatgactga
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