Amphiprion ocellaris (clown anemonefish): 111580008
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Entry
111580008 CDS
T06018
Symbol
shh
Name
(RefSeq) sonic hedgehog protein
KO
K11988
sonic hedgehog
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
111580008 (shh)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
aoce01002
]
111580008 (shh)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
aoce00536
]
111580008 (shh)
Peptidases and inhibitors [BR:
aoce01002
]
Cysteine peptidases
Family C46: hedgehog family
111580008 (shh)
Glycosaminoglycan binding proteins [BR:
aoce00536
]
Heparan sulfate / Heparin
Morphogens
111580008 (shh)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HH_signal
Hint
Intein_splicing
Peptidase_M15_3
Hint_2
Vint
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
111580008
NCBI-ProteinID:
XP_023143330
Ensembl:
ENSAOCG00000006125
LinkDB
All DBs
Position
Unknown
AA seq
415 aa
AA seq
DB search
MLLWTKIVLVGLICLSLVSSGMGCGPGRGYGRRRHPKKLTPLAYKQFIPNVAEKTLGASG
RYEGKITRNSERFKELTPNYNTDIIFKDEENTGADRLMTQRCKDKLNSLAISVMNQWPGV
KLRVTEGWDEDGHHFEESLHYEGRAVDITTSDRDKSKYGTLSRLAVEAGFDWVYYESKAH
IHCSVKAENSVAAKSGGCFPGSSTVTLQDGTKKPVKDLQSGDRVLAADERGNPIYTDFIM
FIDQDSTTRRLFYVIETDAGQKITLTAAHLLFVARNGSTETHRGMSAVFASQVRPGQSVF
VFDDAERLVPVTVKRIYTQTNEGSFAPVTVQGTVVVDQVLASCYAVIEDHDLAHWALAPV
RLAHWVSSLLFSSQQPPASAQSDGVHWYSKILYQLGTWLLDSHSIHPLGMSVSPS
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgctgctctggaccaaaatcgttttggtcggtctcatctgcttgtccttggtgtcctct
gggatgggatgcggaccgggcaggggctacggcaggagaagacacccgaagaagctgaca
cctcttgcgtacaagcagttcatccccaacgtggcggagaagaccctcggggcaagcggc
agatacgaaggcaagatcacaagaaactccgagcgatttaaagaactgactcccaattat
aacacagacatcatattcaaggatgaggagaacaccggtgccgacaggctaatgactcag
agatgtaaagacaagctgaactcgctggccatctcagtgatgaaccagtggcccggggtg
aagctgcgggtcaccgagggctgggacgaggacggacaccacttcgaggagtcgctccac
tacgagggcagggctgtggacatcaccacctcagacagggacaagagcaaatacggcact
ctgtccaggctggcggtggaagcaggattcgactgggtctattacgaatccaaagctcac
atccactgctctgtgaaagcagaaaactcagtggcagcaaagtcaggcggctgcttcccg
ggatcctccacggtcaccctgcaggatggcaccaagaagccggtcaaagatctccaaagc
ggcgaccgggtcctggcagcggacgagcgtgggaacccgatttacaccgacttcatcatg
ttcatcgaccaagactcgacgacgaggaggctcttctacgtgatcgaaaccgacgcgggc
cagaaaataaccctcaccgccgcgcacctcctcttcgtcgcgcggaacggctccacggag
acgcaccgggggatgtcggcggttttcgccagccaggtccgaccgggacagagcgtgttc
gtgtttgatgacgccgagcgactcgtgcctgtcaccgtaaaacggatttacacgcaaaca
aacgagggctcctttgcgccggtgaccgtgcaggggaccgtcgtggtggatcaggtcctt
gcgtcctgttacgcagtgatcgaagaccacgacctggcgcactgggccctggcacctgtc
cggctcgcccactgggtgtcctcgttgctgttcagttcccagcagcctccagccagtgcg
cagagcgacggagtgcactggtactccaaaatcctttatcaattagggacatggctcttg
gacagccactcgatccatccacttgggatgtcagtatccccgagttga
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