Amphiprion ocellaris (clown anemonefish): 111580036
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Entry
111580036 CDS
T06018
Symbol
hif1al
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha, like
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04137
Mitophagy - animal
aoce04140
Autophagy - animal
aoce04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
111580036 (hif1al)
04137 Mitophagy - animal
111580036 (hif1al)
04148 Efferocytosis
111580036 (hif1al)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aoce03000
]
111580036 (hif1al)
Transcription factors [BR:
aoce03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
111580036 (hif1al)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
HIF-1
PAS
PAS_9
PAS_4
Motif
Other DBs
NCBI-GeneID:
111580036
NCBI-ProteinID:
XP_054867960
Ensembl:
ENSAOCG00000012822
UniProt:
A0AAQ5YW70
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All DBs
Position
7:33213605..33242422
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AA seq
654 aa
AA seq
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MEKRDGAVKRTSSEQRKLRSRDAARCRRSQETEIFYELARTLPLPRRVSAHLDKAAIMRV
VLSFLKMQQLLEIGDEKEETVEEAREDLMDSFYPQTLAGFVMVMTEEGDMIYLTENVNKH
IGIAQLELLGQSIYEFVHPCDQEELRDLLTPRPGLSKKSQPSQRNFFLRMKSTLTSRGRT
VNIKSASWKVLHCTGHIRPFGVSSSPPAGRIMTLLCEPIPHPSSVEFPLDSSTFLTRHSM
DMCFTHCEGRVKELVGYKPDDLIGRSVFEFHHALDSEHVSKSMITLLSKGQVSTSHYRFL
ANSGGFVWAETQATVLYNNKTSQPEAVVCLNFILSSVEQPDVIFSIEQTRCGESESQPAA
AAEISGASEESDSDLDSPANLFTKLKEKPEELLLLAPSAGDAIVLLNGGSLELSFASPSS
PTSVPDPQDLCSPQLRQLLSPIFSPLTPPLSSSVSSPELLLSTSEEEGEEEEVMDTREVE
KFFAFWPEDDQKKEDTVEGMEVMDLDMLAPYISMDDDFQLTLLSSLPEEVEKPLTSSCAP
SSAMPTVTLGRKRTHNPDDEELLPQMMIRDKKPKQDPPSIEEELLFTHRLLGSLEEVDPS
DLLLDPGPGHRSRLLTGRDPVLGGIQGLCDTTALMRDIFMPRPPDLSPPLSPMS
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggagaagcgagacggggccgttaaacggaccagctcggagcagaggaagcttcgttcc
cgtgacgccgccaggtgtaggcggagccaggagacggagatcttctacgaacttgcccgg
acgctgccgctgccacgccgagtctccgcccacttggacaaagccgccatcatgagggtg
gtgctgagcttcctgaagatgcagcagctgctcgaaattggagatgagaaggaggagacg
gtggaggaagccagagaagatctgatggactccttctatcctcagacgttggcgggattc
gtcatggtgatgacggaggagggagacatgatctacctgacggagaacgtcaacaaacac
attggcatcgctcagctggagcttctcggtcagagcatctatgagtttgttcatccatgt
gatcaggaggagctgagagacctgctgactccacgccctggtctgagtaagaaatctcag
cccagccagaggaacttcttcctgcggatgaagagcactctgaccagcagggggcgcacc
gtcaacatcaagtctgcttcctggaaggtcctccactgcaccggccacatccgtcctttc
ggcgtctcgtcgtcgcctcctgcaggccgaatcatgactctgctgtgtgaacccatccct
cacccttccagcgtggagttccccctcgactcctccaccttcctcacccgccacagcatg
gacatgtgcttcacccactgcgagggcagggttaaagagttggttggatacaaaccggac
gatctgattggacgctcggtgtttgagtttcatcacgccctcgactccgaacatgtcagc
aagagcatgatcacactgctgtccaaagggcaggtgagcaccagtcactaccgcttcctg
gcgaacagcggtggcttcgtctgggccgagacccaggccaccgtcctctacaacaacaag
acgtcgcagccggaagccgtcgtctgcctcaacttcatcctcagctccgtggagcagcca
gatgtcattttctcaatcgaacaaacccgctgtggtgaatctgaatcccagccggcggca
gcagcagagatcagcggagcttctgaggagtccgattcagacctcgacagcccagcgaac
ctcttcacaaagctgaaggagaaaccggaggagcttctcctgttggctccgtcagccgga
gacgccatcgtactgctgaacggaggttctctggaactttcctttgcgagtccatccagt
ccgacctcggttccggatcctcaggacctgtgcagccctcagctccgacagctgctgtcg
cccatcttcagccctctcactcctccattgtcttcatcggtgtcttcacccgagctgctg
ctgagcaccagtgaggaagagggggaggaagaggaggtgatggacaccagagaggtggag
aagttcttcgccttttggccagaagatgatcagaagaaagaagacactgtggagggcatg
gaggtgatggatctggacatgctggctccgtacatctccatggacgacgacttccagctc
accctcctcagcagtttacctgaagaagttgaaaaacctttgacgtcttcatgtgcacct
tcatctgcgatgcctacagtgacgctgggaaggaaacggactcataacccagatgatgaa
gagctgctgcctcagatgatgattcgggacaagaaaccgaaacaagatcctccgtcgata
gaagaagaacttcttttcacccacagattactgggctctctggaggaagtcgacccgtct
gatctgctcctggatccaggaccggggcatcgaagtcgactgctcaccggcagagacccg
gttttaggaggcattcagggactctgtgacaccacagctctgatgagggacatcttcatg
cctcgccctcctgatctctcccctcctctctcccccatgtcctga
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