Amphiprion ocellaris (clown anemonefish): 111580160
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Entry
111580160 CDS
T06018
Symbol
blm
Name
(RefSeq) recQ-like DNA helicase BLM isoform X1
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03440
Homologous recombination
aoce03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111580160 (blm)
03460 Fanconi anemia pathway
111580160 (blm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aoce03032
]
111580160 (blm)
03400 DNA repair and recombination proteins [BR:
aoce03400
]
111580160 (blm)
Enzymes [BR:
aoce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
111580160 (blm)
DNA replication proteins [BR:
aoce03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
111580160 (blm)
DNA repair and recombination proteins [BR:
aoce03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
111580160 (blm)
Bloom's syndrome complex (BTR)
111580160 (blm)
FA (Fanconi anemia) pathway
111580160 (blm)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
BLM_N
BDHCT
Helicase_C
RecQ_Zn_bind
HRDC
RQC
Motif
Other DBs
NCBI-GeneID:
111580160
NCBI-ProteinID:
XP_023143543
Ensembl:
ENSAOCG00000003318
LinkDB
All DBs
Position
3:11320999..11331615
Genome browser
AA seq
1406 aa
AA seq
DB search
MSDLPQNNLKEQLARHSNAAQSKLCLAKPKTGAFSFKKKSSSGTAKVEVATKVISSNVLA
NRNVNVPKNSLVTQSLLTFSNKLERPQKSKINFFPVSSKCESDSINQASSPSPACQTPAA
VSSFKAAPAQSDNQFSSGKEINSPSLDASLGIPMDDWDDFDDFETPAKTKNDSFSSETSG
KSSKLLSSATEKIAKFSEKLHHDASPKTQTGEDSCMETDEPECSVDKAAVSPCPSFEDSP
VSPVKVTRRRPPAHVIDSEEDCDAPSEPFEESADSKKKWIDPKVINLDNNSEPEDDFDYV
PPSPVSNEISYATSVLEKRPNSADVQSRDNPVQSKGPITTRHESSHCKSKDKTNEQLFSI
MESICALVDSIPEHELITLSCGSELLLKRAQRKRILATGDDSLFKMQQPDSTVASESSFK
ETSSSRCDTSSGVLYISSVPVDSKNAPQRSRSSVISVDYESDHSDSIIDLKPLHSNTSTT
VCVENESFCDSPSAHSLIKPSFKFSKKESTDVEDPDLFFSPKTETGVQTKTNTPMFTAAD
DIPDDFYIDDFDIDDFNDCDIPEYFDEPPTTSVSTQNSSTVTTTVKEGGPCKFSWERKPT
TPVSAPKPSQICSPEPTFRNPAHDRFRGFNFSHSPEMMKIFHKRFGLHQFRFNQLEAINA
TILGEDTFVLMPTGGGKSLCYQLPACISQGVTVVISPLKSLIVDQIQKLTTLDIPATSLS
GDKSDSEAQRIYMQLSRKDPIIKLLYVTPEKVSASNKLISALQNLYERELLARFVIDEAH
CVSQWGHDFRPDYKKLHELRQRFPSVSMMALTATATPRVQKDILNQLNMTRPQVFTMSFN
RTNLKYSVLPKKPKKVDEDCICWIKKHYPRDSGIVYCLSRNDCDAMAESLQRAGISALAY
HAGLRDGDREYVQTKWINQDGCQVICATIAFGMGIDKPDVRYVIHASLPKSVEGYYQESG
RAGRDGEISHCILFYSYADVHRIKRIISMDREGDKHAKATHYNNLHSMVHFCENVMECRR
IQLLAYFGELKFNKSFCKDHPDVSCDNCAKPNQYKMRNVTEDVKKIARFVQENCEKVGSK
YGRTAQQNRLTLNMLVDIFIGSKSAKIQTGMFGIGGAYSRHNADRLFKKLVLDNILVEDL
YITVNGQAVSYISAGTKAMNVLSGHMQVEFYETESASTIRKQKAAAYKNVSQRDKMVQEC
LKELTDLCKQLGKAFSIHYYNIFSTATLKKIAEKLSSDPEALLQIDGVTEDKLEKYGAEV
MKVLQKYSEWQLPAEEQTESGEDGWIDTTRGRARIDYDDDEDDAESSTYFRNNTAQGQKR
KKAPFFKYSKKKKAFGNSGSSYKGRGYSSNKSWSSSGSTGGSRGAGRGFMGSAGDTSAGR
KPGFLAAPMPQSNQRPFLKPAFSHLS
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatcttccacaaaacaacttgaaggaacagctggcgaggcacagcaatgctgct
caaagcaagctgtgtctggctaaacctaaaacgggggccttttctttcaaaaagaagtcc
tcatcaggtacggccaaagtggaagtcgctaccaaggtaatcagctcaaatgttctggca
aacaggaatgtcaatgtccctaagaacagtttggtaactcagtctcttttgacattttca
aacaagcttgagagacctcaaaagtccaaaatcaacttctttcctgtcagctcaaaatgt
gagtcagactccatcaaccaagcaagtagcccttctcctgcatgtcagactcctgcagca
gtgtctagttttaaggcggctccagctcaatctgacaaccagttttctagtggcaaagaa
atcaattccccaagtctggatgcatctcttggtatcccgatggacgactgggatgatttt
gacgactttgaaacgcctgccaaaacaaaaaacgattcattcagttcggaaacatcagga
aaaagcagcaagctactgtcatctgctactgaaaaaatagcaaaattctcagagaaacta
caccatgatgcctctcctaagacacagactggtgaggactcttgtatggaaacagatgaa
ccggagtgcagtgttgataaagctgcagtttcaccatgtcccagcttcgaggattctcct
gtttctcctgttaaagtgaccagaagacgtccccctgcacacgttattgatagtgaagaa
gattgcgatgctccatctgagccctttgaagaaagcgcagacagtaagaaaaaatggata
gacccaaaggtaatcaatcttgacaacaactctgagcctgaagatgactttgattatgtt
cctccttcaccagtcagcaatgagatctcttatgcaacctcagtattggagaaaagacca
aactctgctgatgttcaaagcagagacaatcctgtgcaatcaaagggtcccatcacaaca
cgacacgaatcctctcattgcaagtcaaaagacaaaacaaatgagcaactcttcagcatc
atggagtccatttgtgctcttgttgattccatccctgaacatgaactaatcactctgtcc
tgtggaagtgaacttttactgaagagggctcaaagaaagaggattcttgcaactggtgat
gattctttgtttaagatgcagcagcctgacagcactgtggcttctgaatctagctttaag
gaaacgtcttcttctaggtgtgacacctctagtggtgtgttgtacatcagctccgtgcct
gtggactccaagaacgctcctcagcgcagcagatcttcagtcatctccgtggattatgaa
tctgatcactctgacagtattattgatttaaagcccttgcacagtaacactagcacaaca
gtatgtgtggaaaatgagagtttctgtgactctccatcagcccacagcctcataaaacca
tcttttaagttctctaagaaagagagcacggatgttgaggacccagatctcttcttctca
cccaagacagagaccggtgtgcagacaaaaacgaacaccccaatgtttacagctgcagac
gatataccagacgacttctacatcgacgactttgacatagatgacttcaatgattgtgac
atccctgagtactttgacgaacccccaactacatcagtttctacacagaactccagcact
gtgacgacaacagtgaaagagggggggccatgcaagttctcatgggagaggaaaccaacg
acacccgtttctgcaccaaagccttcacagatttgttctccagagcccaccttcagaaac
ccagctcatgatcgcttcagagggtttaacttctcccactcaccagagatgatgaagatc
tttcacaagcgttttggacttcaccagttcagatttaatcaactggaagcaattaatgct
acaattctgggagaagacacatttgttttgatgccaacaggtggaggtaaaagcttgtgc
taccagctgcctgcctgcatctcacagggagtcactgtggttatttccccactcaagtcg
cttattgtagaccagatccagaaactcaccaccctagatattccagcaacaagtctatcc
ggtgacaaaagcgacagtgaagcacaaaggatttatatgcagctttccaggaaagacccc
attattaaactgctctacgtcacacctgaaaaggtgagtgcaagtaacaagttgatctcc
gcactgcagaacctgtacgagcgagagcttctggcccggttcgtcatagatgaggcccat
tgtgtcagtcagtggggccatgatttccgtccggactacaagaaattgcatgaactgcgt
cagaggttccccagtgtgtcgatgatggctctgacggccaccgccactccccgtgtgcag
aaagacatcctcaaccagctgaatatgactcgtccacaagtgtttaccatgagcttcaac
agaacaaacctgaagtactctgtgctgcccaagaaacccaaaaaggttgacgaggactgc
atctgctggatcaagaagcactacccacgcgactctggaattgtctactgcctgtctcgc
aatgactgcgacgccatggcagagagtctgcagagagcagggatatcagctctggcatat
cacgcaggactgcgtgacggtgacagagaatatgtgcagactaaatggatcaatcaggac
ggttgccaggtcatctgtgccaccatagcctttggcatgggcattgacaagccagatgtg
cgctatgtgatccacgctagtctgcctaaatcagtggagggttactaccaggagtcagga
agagctggcagggatggagagatctctcactgcattctcttctactcttacgctgacgtc
caccgtatcaagaggattatcagcatggacagagaaggtgacaaacacgccaaggccact
cattacaacaacctgcacagcatggtgcacttctgtgagaacgtgatggagtgcagaaga
attcagctgctcgcatactttggggagctgaagttcaacaaaagcttctgtaaggaccat
ccagacgtcagctgtgacaactgtgccaaacccaatcaatacaagatgagaaatgtgact
gaagatgtgaagaagattgcgcggttcgtccaggagaactgtgagaaagttggatccaag
tatggcaggacagctcagcaaaaccgactgacactgaacatgctggtggatatcttcata
ggatctaaatctgccaagatacagacgggaatgtttgggattgggggagcctactccaga
cataatgctgaccgtctgttcaaaaagctggttctggataatatcctggttgaggacctt
tacatcacggtcaacggtcaagctgtgtcttatatctctgctggaacaaaagccatgaac
gtgctgtctggacacatgcaggtggagttctatgagacagagagtgcatcgaccatcagg
aaacagaaagctgctgcatacaagaacgtctcccagagagataagatggtccaggagtgt
ctgaaggagctgacagatctgtgcaagcagcttggcaaagcgtttagcattcactattac
aacatcttctctaccgccactttgaaaaagatagctgagaagctttcctctgaccctgaa
gccctcctacaaatcgacggtgtgacggaggacaaactggagaagtacggagctgaagtc
atgaaggtcctacagaaatactctgagtggcagctgcctgcagaggagcagactgagagt
ggtgaagacggttggattgacacgacacgaggccgcgcacgtatagattacgacgatgac
gaggatgatgcagagtcctccacctacttccgtaataacactgcacaggggcaaaagaga
aagaaagccccattcttcaagtattccaagaagaaaaaagcatttggcaactcaggctcc
agttacaaaggtcgtggctacagcagcaataagtcgtggtcatcgtccggctccacaggt
ggatccagaggtgcaggtcgagggttcatgggctcagcaggagacacatcagcgggtagg
aaaccaggattcctggccgccccgatgcctcaaagcaaccagcgacctttcttaaagccg
gcattttcacacttgagctga
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integrated database retrieval system
