Amphiprion ocellaris (clown anemonefish): 111580192
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Entry
111580192 CDS
T06018
Symbol
ushbp1
Name
(RefSeq) uncharacterized protein ushbp1 isoform X2
KO
K21881
Usher syndrome type-1C protein-binding protein 1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
aoce03037
]
111580192 (ushbp1)
Cilium and associated proteins [BR:
aoce03037
]
Primary cilia and associated proteins
USH complex and associated proteins
111580192 (ushbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USHBP1_PDZ-bd
Phage_TAC_11
APG6_N
Polo_box_2
Motif
Other DBs
NCBI-GeneID:
111580192
NCBI-ProteinID:
XP_023143594
Ensembl:
ENSAOCG00000003013
LinkDB
All DBs
Position
2:complement(22000602..22010280)
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AA seq
711 aa
AA seq
DB search
MEDSRRSRCDSLDAGSGCDTEVMNPNDHISFDPEGPDPAVNLEPSQAELAQCEAEVGTLL
SIIAELNKKMGSLKAPSEPGDMRPAAPSRPLVPDLLSHRLVRRSPERNTASTVSSKPPMT
EQGGSGVVWSKLQEVLSSVEDSISCRRTWAIPITASDQDKHKEHLRAAEENWDKATQILE
EMEREFGISCPLGLLKDQYQEDTLDVDQRESVLRNSLQGHQEELQRAQSNISQMEEDRNK
LVVLHKAWRSSSHSPSFRPSTGALSPDWASPPYPGSPLLHRRTTRALTPLIVGGDGSPLG
SVNSGSPCPSPISLESETERLNRCIERLKARNERLTAALERRKGESEQISITLSRLESDC
SALQMALRYCEECEEAYSELLSLYDARKQQSIPSQTDSAGACIPVPVGDRQPPDSPSAQL
RKMGTEELSTSFSTAGVTEETETQSHTMQRTPEPEVVREAALRQQIERLKKDRAAICLPK
PGPGAESKLSPEAGQPAGSRWGHMTKDNTKPPDSKKEKASLFYELISVREEMSDLRALIR
LKEKELRCLEWSLVGQKAQEAAGVFIPESLREEVEDRKTEQQRLCENAVKLGCDGDIIGP
RTRPILKELQAVLLREQALKKRLALVQDSLNAALSDSATHRRDNGEQIARLTQAHSKALS
SYRQIRRKYREQVWRLEQKVVAMTESHNHNQSGATKAAGEALEWRREETVL
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggaggattccaggaggagcagatgtgatagtctggatgcaggatcagggtgtgacaca
gaggtgatgaacccaaacgaccatataagctttgaccctgagggccctgaccctgcagtc
aacctcgagccctcgcaggcagaactggctcagtgtgaggctgaagtgggaactctgctc
agcatcatcgctgaactgaacaagaagatggggtcgctgaaggcacccagtgaaccaggt
gacatgagaccagcagctccatccagacctctggttccagatcttctgtctcaccggctg
gtcagacgcagcccagagaggaacactgcctccactgtctcatctaaaccaccaatgact
gagcaaggaggcagtggtgttgtctggagcaaactgcaggaggttttatcatcagtggag
gactccatcagctgtaggaggacatgggccatccccatcacagcctctgaccaggacaaa
cacaaagagcacctcagagcagctgaggagaactgggataaagccacccagatactggag
gagatggaaagagagtttgggatttcgtgcccattaggcctactgaaggaccagtaccag
gaggacacgctggatgtggatcaaagagagtctgtcctcagaaacagtttacagggtcac
caggaggagctgcagagagcacaaagcaacatcagccagatggaagaagacaggaacaag
ttagttgttcttcataaggcctggaggtccagcagccactccccatccttccggccctct
actggggctctcagtccagactgggcctctcctccttaccctggttcaccgttactccac
agaagaacaaccagagctctaacaccgctaattgtgggtggggacggttctccgttgggt
tccgttaactcaggcagtccttgtcccagccccatcagcctggagtctgagacagaacga
ctgaacagatgcattgagaggctgaaggccagaaatgaacgtctgactgccgctctggag
agaaggaagggagagtcggagcagatcagtattactttaagcagacttgagtctgactgc
tcggccctgcagatggctctcagatactgtgaggagtgtgaggaggcctacagcgagctc
ctgtcactttatgatgcaaggaagcagcaaagcattccttcacagacggactcagcaggt
gcttgcataccagtgccagtcggtgacaggcagccgcccgacagtccatcagctcagctc
aggaaaatgggaactgaagagctgtccacctccttctcaacagcaggggtcacagaggag
acggaaacacagagtcacacaatgcagaggacacctgagcctgaggtggttcgggaagca
gctctgcggcagcaaattgagcggctgaagaaggaccgagcagccatttgcctccctaag
ccaggtccaggggcagagagcaaactgagccctgaagctggtcagccagctggatccaga
tggggacacatgactaaagataacaccaaacctcctgacagcaagaaagagaaagcttcc
ctgttttatgagctcatctcagtcagggaggagatgtctgatctgcgcgctctgatccgc
ctcaaggagaaagagctgaggtgtctggagtggagtttagtgggccagaaggcccaagaa
gctgctggagttttcatcccagaaagtctccgagaggaggtggaggatcgtaagactgaa
caacagaggctctgtgagaacgcagttaagctcggttgtgacggagacatcattggacct
cgaaccagaccgattctgaaagagctgcaggcagttctactgagggaacaagctctgaag
aaaagactggctttggtccaagactccctgaacgcggctctctcagacagcgccacccac
aggagggacaatggagagcagatcgctcgtctcacacaagctcacagcaaagccttgagt
tcgtatcggcagattcgcagaaagtaccgggagcaggtgtggaggttggagcagaaagtg
gtggccatgacagagagtcacaaccacaaccagagtggagcaacaaaagctgcaggggag
gccttggagtggaggagggaggaaacagttctatga
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