Amphiprion ocellaris (clown anemonefish): 111580243
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Entry
111580243 CDS
T06018
Symbol
sart1
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
KO
K11984
U4/U6.U5 tri-snRNP-associated protein 1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111580243 (sart1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aoce03041
]
111580243 (sart1)
04121 Ubiquitin system [BR:
aoce04121
]
111580243 (sart1)
Spliceosome [BR:
aoce03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
111580243 (sart1)
Complex C
U4/U6.U5 tri-SnRNP specific factors
111580243 (sart1)
Ubiquitin system [BR:
aoce04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111580243 (sart1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SART-1
HIND
HA
Motif
Other DBs
NCBI-GeneID:
111580243
NCBI-ProteinID:
XP_023143637
Ensembl:
ENSAOCG00000002873
LinkDB
All DBs
Position
4:complement(25857312..25860148)
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AA seq
773 aa
AA seq
DB search
MGSSKKHKEKSRDKDTEERRREHKKHRHKERERDASDRDTTRDKEKRKRSRSRERSRRES
RGKGERSTGEPRVKKEKVDLGYEESNTEVEPQSASGDASLSIEETNKLRAKLGLKPLELN
ENKKELGTKEEPMVAETINPVLIQQQKEMREKLAAMKEKRILNQKLGKVKTLAEDDWLDD
TAAWVERSRKLAKEKEMAEKRAKLLEEMDEEFGVSSLVEEEFAQSKQDAYTSQDLKGLKV
QHKVDSFSEGQTVILTLQDKGVLEEEEDVLVNVGMVDKEKAEKNVELKKKRPDYKPYEEE
ETVDDMVSFKSHSVLSKYDEEIEGEKKKSFRLSTGGFADGERERELQAMREMLRNQAQSL
EMPALSIASEYYTPQEMVGFKKTKRRVKKIRKKEKQTAADELMLDDTRSSDFGSRTRGRG
RRTVGDESEEVKEEEVRLSEAIPALSDDIRMAEMDISDDEDFTPPEPAVIEEDEAEQELQ
KQLEKQRKLKQKQLLKDSGEKVAEQIKVLGKGDNDSDADKRNNIVFNATSEFCRTLGDIP
TYGLSGNREDQEDIMDFEQEEEKDDAGDSDSEMDENVGWSTVNLDEEQKQPDFSTASATI
LDEEPIVNSGLAAALLLCKNKGLLDTQMQKVARVKAPKGALPNDNYCIEDKMGFDDKYSR
REEYRGFTQDFKEKESYKPDVKIEYVDESGRKLTPKEAFRQLSHRFHGKGSGKMKTERRM
KKLEEEALLKKMSSSDTPLGTVALLQEKQKSQKTPYIVLSGSGKSMNANTITK
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggggtcgtccaagaaacacaaggaaaagagccgcgacaaggacacagaagagcgccgt
cgcgaacataagaaacatcgccacaaggaacgagagagagacgcttcagatcgggatacg
acccgggataaggagaaacgaaaacgctccagatccagggaaagaagcagacgggagagc
cgcggcaaaggcgaaaggagcaccggagagccacgagtgaaaaaggagaaggtagatctg
ggatatgaggagagtaatacagaagtggagccccagtctgcaagcggggacgcatctctc
agcattgaggaaacaaacaaactcagggccaagctgggtctgaagcctctggagctgaat
gagaacaagaaggagctcgggaccaaagaggagccgatggttgctgagaccatcaatcct
gttctcatccagcagcagaaggagatgagagagaagttggcagccatgaaagaaaaacgc
atcctcaaccagaaactggggaaagtcaaaaccttagcagaggatgactggctggatgac
acagctgcttgggtagagagaagcaggaagctggcaaaagaaaaagaaatggcagagaaa
agagccaaacttctagaagagatggatgaagagtttggtgtcagcagtctggtggaggag
gagtttgcacaaagcaaacaggatgcgtacacatcccaagatcttaagggactcaaagtg
cagcacaaggtagactccttcagtgagggccagactgtcatcctgaccctccaagacaaa
ggtgtgcttgaggaggaggaagatgtgcttgtaaatgtgggaatggtggataaggaaaaa
gcagaaaagaatgtggagttgaaaaagaaaaggcctgattacaagccctatgaagaagag
gagactgtggatgacatggtttcatttaaatcccactctgtgctgtcaaagtatgatgag
gaaattgagggtgaaaagaaaaagagcttccggttgagtaccgggggctttgctgatggg
gagcgagagcgagagctccaggccatgagagaaatgctgcgaaaccaggcacagtctttg
gaaatgcctgctctcagtattgcttcagagtattacacaccgcaggaaatggtgggcttt
aaaaagacaaaacgccgtgtaaaaaagatcaggaagaaggagaagcagacagctgcagat
gaacttatgcttgatgacactcgcagctcagattttggatccaggacacgtggccgaggc
cgcagaacggtgggggatgaaagtgaagaagtaaaggaggaggaggtcagattgtcagaa
gctatccctgcattgtctgatgacatcaggatggcagaaatggacataagcgatgatgag
gactttacacctcctgaaccagctgtgattgaagaggatgaggcagagcaagagctgcag
aaacagctggagaagcagaggaagctgaaacaaaagcagcttctaaaggactctggggag
aaggtggcagagcagattaaagtgctcggtaaaggtgacaatgacagcgatgcagacaag
aggaacaacattgtgttcaatgccacctcagagttttgcagaactctgggtgacattcca
acttacggactgtcaggcaacagagaggatcaggaagatattatggactttgaacaggaa
gaagagaaagatgatgctggagattcagactccgaaatggatgagaatgttggatggagc
accgttaacctggatgaagagcaaaaacaaccagatttctccacagcctctgccaccatt
ttggatgaagagcccattgtcaactccggccttgctgctgccttgctgttatgcaaaaat
aaaggtctgttggacactcagatgcagaaggtcgctcgtgtcaaagcaccaaagggcgcc
ctgcccaatgacaactactgcattgaggacaagatgggctttgatgacaagtacagtcgc
agagaagaatacagaggcttcacgcaggatttcaaggagaaagagagctacaagcctgat
gtcaagattgagtacgtagatgagtctgggcggaaactcactcctaaagaagccttcagg
cagctttcacatcgattccacgggaaagggtctggaaagatgaagacagagaggaggatg
aaaaagctggaggaagaggctctgctgaagaagatgagcagcagcgatactcctctgggg
acggtggcattgcttcaagagaagcagaaatctcagaaaacgccatatattgtgcttagt
gggagtgggaaaagcatgaatgcaaacaccatcactaaataa
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