Amphiprion ocellaris (clown anemonefish): 111580273
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Entry
111580273 CDS
T06018
Symbol
sec24c
Name
(RefSeq) protein transport protein Sec24C isoform X1
KO
K14007
protein transport protein SEC24
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111580273 (sec24c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aoce04131
]
111580273 (sec24c)
Membrane trafficking [BR:
aoce04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
111580273 (sec24c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
111580273
NCBI-ProteinID:
XP_035812051
Ensembl:
ENSAOCG00000023347
LinkDB
All DBs
Position
18:33060691..33087358
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AA seq
1253 aa
AA seq
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MNVNQHTPMASPYGQPQPGYSQPGYVPLDGGYPGPYAPYNGPASPYQPGAPPQGYSPFTS
FPSKAVAANPVSDLSSPLDLGISGPARGPPTTGPLPVSAPHQYNQYSHSQGDMQNGPPPM
TQAQPRPPVSQPYNPGAMNMSGPHPTYPQHYGPPPTMQQVSNQMSGMQITSGPPTPAGPG
YAPPHSSQPPVSTAYSAPPPPSYTQAPPPVSSAPTQPPPPSGPAASQQYYGSPPPPSQQP
FNSSLPPTSQQQFTSSSVPPPPSQQTLPPSSYSGPAPPPGQAPAPPVSQPQQSFPPSQPP
PTSQPAFTPGPPPTAPGSFTPQAPPPSSQSGSFPPPGPPPTSAPSCQYPGPLPPQQQPPP
SQPFPYHSGPPPPRAQMPPTSMAQSNHLPPGPQGPPGPPGPLQQPPSQPGMQTGYPPQQN
GAFGQVRGPQPGYAGPYPGQPNYGAPAPAPAPAPPAQKRLDPDAIPSPQASDMPAVQKSR
HRIDPDAIPSPIQVIEDDKAKSTEPFTTGVRGQAPPLVTTNFQVKDQGNASPRFVRCTAY
NMPCTADMAKQSQVPLAAVVKPLAMLPPDETPPYLVDHGEGGPIRCNRCKAYMCPYMQFI
EGGRRFQCGFCSCVTEVPPHYFQHLDHTGKRVDCYDRPELSLGSYEFLATVDYCKNNKLP
QPPAFIFLIDVSYNAVKSGMVNIVCQELKTLLDYLPRENPEMDSAVRVGFVTYNKVLHFY
NVKSSLAQPQMLVVSDVSDMFVPLLDGFLVNVNESRLVIESLLDQIPEMFADTRETETVF
GPVIQAGLEALKAADCAGKLFVFHTSLPIAEAPGKLKNREDKKLIGTDKEKSLFQPQVGF
YNTLAKECVAQGCCVDLFLFPNQYVDVATLGVVPVSTGGSVYKYTYFQAQLDQERFLNDL
RRDVQKLVGFDAVMRVRTSTGIRATDFFGSFFMSNTTDVELAGLDCDKAITVEFKHDDKL
SEETGALMQCAVLYTSCSGQRRLRIHNMAVNCCSQLADLYRNCETDTIINFFSKYAFRGV
LNNPTKAVRDTLVNQCAQILACYRKNCASPSSAGQLILPECMKLLPVYLNCVLKSDVLLP
GADVSLDDRAYLRQLISCMDVTETHVFFYPRLLPLMKLESGSLPVAVRDSEERLSKGGVY
LLETGLHLFLWVGASVQQELLLNIFGTPSFGQIDSSMTSLPVLDNPFSQRLREIIDSFRA
QRSRYMKLMVVKQEDRAELIFRHFLVEDKSASGGASYVDFLCHMHKEIRQLLS
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtaaaccagcacactccaatggcctctccatatggccagccccagcctggctac
agtcagcctggctacgttcccctggatgggggataccctggcccgtacgccccctacaac
ggccctgcttcaccctatcagcccggggcaccgccacaaggttattctcctttcacaagc
tttccctctaaggctgtggcagccaatccagtctctgacctctcttctcctcttgactta
ggcatttcaggtcctgccaggggtccccccaccactggaccccttcccgtctcagcacct
caccagtataatcagtacagtcacagtcaaggggacatgcaaaatggacccccacctatg
acgcaggcacaacccaggcctcctgtgtctcagccatacaacccgggagctatgaatatg
tcggggcctcaccccacctatcctcaacactacgggcctccacccacaatgcagcaggtc
tccaaccaaatgtctgggatgcagatcacctctggaccaccgaccccagctggtccagga
tatgctccacctcacagctcccagcctcccgtcagtactgcctactcggccccacctccg
ccctcctacacccaggctcctcctcccgtgtcctctgctcccacccagccaccacctccc
agtggccccgcagcttctcagcaatactatggaagcccaccgcctccttctcaacagcca
ttcaactcttctctcccccctacctctcaacagcagttcacctcttcttctgtaccaccg
cctccatcacagcaaactttacctccatcctcctactcgggtcctgcacctccacccggt
caagctcctgctcccccggtgtcccagccgcagcagtccttccctccatcccagcctcca
cctaccagccaacctgccttcacccctggcccaccccccactgccccgggctccttcaca
cctcaagcacccccaccttcctctcagtctgggtcttttcctcctcctggtcctcctccc
acctcagctccttcttgtcagtacccaggcccactgccaccacagcagcagccccctcca
tcccagccgttcccctatcactcagggccccctcctcccagagctcagatgcctcccact
tccatggctcagagcaaccacctgcctccaggacctcagggcccaccaggcccccctggg
cccctgcagcagcctccatcacagcctggcatgcagacaggataccctcctcagcagaat
ggggcgtttgggcaggtgagaggccctcagcctggctatgcaggcccttatcccgggcaa
ccaaactatggagcccctgcaccagcaccagctcctgctccacctgcacagaaaagactc
gacccagatgccattcctagcccgcaagcgtctgacatgccggctgtgcagaaatcaaga
catagaatagatccagacgctatccccagcccaatccaggtaatagaagatgacaaggca
aagagcaccgagccattcaccaccggggtcagaggtcaggccccaccgctggtcaccacc
aacttccaggtcaaagaccaagggaacgccagtcccaggtttgttcgctgtacggcctat
aatatgccttgcacagccgatatggccaagcagtctcaggtgccactggctgccgtcgtc
aagccccttgccatgctgccgcctgatgagacccctccgtacctggtggaccacggcgag
ggcggtccaatccgctgcaaccgctgcaaggcctacatgtgtccgtacatgcagttcata
gaaggaggccgccgcttccagtgtgggttctgcagctgtgtcacagaggtgcctccacat
tacttccagcatctggaccacactggtaagagggtggactgctatgaccggccggagctt
tcgctgggcagctatgagttcctggcaaccgtcgactattgtaagaacaacaagcttcca
caacctccagccttcatcttcctcatcgatgtgtcctacaacgctgtgaagagcggaatg
gtcaacatcgtctgccaggaactcaagaccctgctggactacctgcccagggagaaccca
gaaatggactctgcagtgcgggtgggtttcgtcacctacaacaaggttttgcacttctac
aacgtcaagtccagcctggcccagccgcagatgctggtggtgtcggacgtgtcagacatg
tttgtcccgctgctcgacggcttcctcgtcaacgtaaacgaaagccggctagttatcgag
agtttgctggaccagatcccagagatgtttgcagacaccagggagacagagacggtcttt
ggacccgtcatccaggcaggactggaagctctcaaggccgctgactgtgcagggaagctg
tttgtgttccacacctctctgcccatcgcagaggctcctggcaaactaaagaacagagaa
gacaagaagctgattgggacagacaaggagaagtcgctgtttcagccgcaagtgggtttc
tataacactctagccaaggagtgtgttgcccagggctgctgtgtggatcttttcctcttc
cccaaccagtatgtggatgtcgccacgttgggagtggttcccgtctccactggagggtca
gtctacaaatacacctacttccaggctcagttggaccaggagcgattcctgaacgatctc
agacgagacgttcagaagctagtaggcttcgatgctgtaatgagggtgcgaaccagcaca
ggtattcgagccacagacttctttggctcctttttcatgagtaacaccacagatgtggag
ctggcaggcctggactgtgacaaggccatcaccgtcgagttcaaacatgatgacaagctc
agcgaggagacgggagcgctcatgcagtgtgctgtgctttacaccagctgcagtggccag
aggcgtctccgcatccacaacatggcagtcaactgctgctctcagttggctgacctctac
cgcaactgtgagacggacacaatcattaacttcttctccaaatacgctttccgtggcgtc
ctaaacaaccccacgaaggccgtgagagacactctggtcaaccagtgcgctcagattctg
gcctgctacaggaagaactgtgcaagtccttcgtctgctggtcagctgattctccccgag
tgcatgaagctactccctgtttacctgaactgcgtgctgaagagtgacgtgctgcttcct
ggagctgacgtctcattggacgaccgggcttacctgagacagctcatcagctgcatggac
gtcacagagacccacgtcttcttctaccctcgtctgctgccactgatgaagttggaaagc
gggtcgttgccagtggcagtgagggattcagaggagaggttgtcaaaaggtggagtttac
ctcctggagacgggactccacctcttcctgtgggtgggagccagcgttcagcaggagctg
ctgctcaacatcttcggcacgccgagcttcggccagatcgactcgagcatgacaagtctg
ccagttctggacaaccccttctctcagagactccgagagatcatcgactccttcagagca
cagcgatcacgatacatgaagctgatggtggtgaagcaagaagacagagccgagctgatc
ttcaggcacttcttggtggaggataagagtgccagcgggggagcgtcatacgtggacttc
ctgtgtcacatgcacaaggagatccgacagctgctcagctag
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