Amphiprion ocellaris (clown anemonefish): 111580423
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Entry
111580423 CDS
T06018
Name
(RefSeq) uncharacterized protein LOC111580423 isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
111580423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aoce03009
]
111580423
Ribosome biogenesis [BR:
aoce03009
]
Eukaryotic type
Pre-60S particles
RNases
111580423
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
REX3_middle
Motif
Other DBs
NCBI-GeneID:
111580423
NCBI-ProteinID:
XP_023143922
Ensembl:
ENSAOCG00000018049
LinkDB
All DBs
Position
6:35008954..35021388
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AA seq
1188 aa
AA seq
DB search
MFPSFGLFSDINCPLAQRGQCKRPHCLYKHAAEARYAFGASSTLVFAGVRNGCLFTACGA
PVNDETGDCLHELEQINKEIETVRHEVEQEQRRLSHYQTVQADGRNSASIYKYETAGKNV
DRGLNGLLSCSGFTKTHAKARKYVVDNSKPRTDLEYDPLSNFSADLGTCSSSGKDQKSQQ
GLKKARISVSCDRKEPAKFQVLLSRSQSTELHDDSNEDSVLIIDVPPSPDEKRGQTQKPI
VSVAGRFSQDAVGEVMEAETVPILSDTSLKVTSPSTSRVDTNKVQNYCDVKNSQDLPTCI
DNEGLEKTPIDGNVVDLSGCLKALNNECQKIIGFQSTETLVEKIHDPVSLLATSDKQNHS
WNNPWCELPNNVEKINQLQPPKNSLFYKAPADNSSQTQHSKQAQTTKQQALTRVHNQWPP
EQSSVVMSGKMQGKAATASVVSVGYEEQAESPSGSNTHVTNRAGSSYETTEQLLVKADCE
EIIIISSDDEADELNYSEMELSDSDPMEECYRIFMEANNEEKGNEAQPDIPIGAMDVVKP
EVNTPPQTLRGKKRVAHEAKPTEQPVAKSRPQPQVLVPLRGPAASGFGSRPSITSKLQQV
QQRASMLSASVKGGQAFVSSTCQNKPETQSAPSALTQTPGNLQPALIQNAYLNYIPVGTA
VEVGDNLHLILPEGAFPLPVASSSSPVTTVLTPISQMHQSAFTVKQTYHPPIVTPVQRYC
STAPVLIPPPVRKSSLTSAFASTSLQSSPASCTVPQASVQAVIKPISTKRKLKQQQCEAA
KEKVPHDVRQRYVSLFTEEFLKTTGNANDAFEKALSEERTVYNRSMNKLKYLSIAVNALK
KMKNQSAVAAKGENEVNSQRLKGNIPLNLKKFKANADDMALYESLKDYILTYEKLTEGNY
PVQHPERHGCAIVFIENKRVHADPLKRICCRCGATYSVSQTGKHIRKEECNYHYGKAVKN
RVPGGVETRYSCCEGVMGTPGCQMFKLHVHDSLSLDGFVSTLSRCPSDTGCPGIYSLDCE
KCYTIHGLELSRVTVVNSSLQVVYDTFVRPDNEVIDYNTRFSGISEEDVKGNHTSLREVQ
ETLLSFINADTILIGHGLETDLCLLKLLHGTVVDTSVIFPHRLGPPHKLTLNSLTAEYLR
RIIQESGGLWPRHCRRRCCLHGAHAVEGQRRWKNEKMPAIKPVSAVHT
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgtttccctctttcggacttttttccgacataaactgtcccttggcacagcgtggacag
tgcaagcggcctcactgtttgtacaagcacgccgcagaagcgcggtatgcgtttggtgcg
tcgtcgacgttggttttcgcaggggtccggaatggctgtttatttactgcctgtggagcc
ccagtgaatgatgagactggagactgcctccatgagctggagcagatcaacaaagaaatt
gagactgtaagacatgaggtagagcaggagcaaaggcgactgtcacactaccagactgta
caggcagatggcagaaacagtgcatccatttacaagtatgagactgcaggtaaaaatgta
gacagaggtcttaatggactgctttcatgctcaggctttactaaaacgcatgccaaagca
aggaagtatgtggttgataactcaaaacctagaacagatttggagtatgaccccctgtcc
aacttctctgctgacttggggacttgcagctcttccggcaaggatcagaaaagccagcaa
ggtttgaaaaaagcaagaatttctgtatcttgtgaccgaaaggagccagccaaatttcag
gttctgctctctagatcacaatcaacagagctacatgatgactctaatgaagacagtgtc
ctgattattgatgttcccccatcacctgacgaaaagagaggtcagactcagaaacctatt
gtttctgtagctggcagattctcccaggatgcagtaggggaagtgatggaggctgaaaca
gtacctattttatctgatacttctctaaaggtcacatctccatctacttcaagagttgat
acaaataaagttcagaattattgtgatgttaagaacagtcaagatctaccaacttgtatt
gataacgaaggacttgaaaaaacaccaattgatggaaatgtagttgacttatctggatgt
ttaaaagcccttaataatgaatgtcaaaagattattgggtttcagtctactgaaactcta
gtggagaaaatccacgaccctgtaagtcttcttgccacctcagacaagcaaaatcacagt
tggaacaatccttggtgtgagctgcccaataatgttgagaaaattaatcaactgcagcca
ccaaagaactccttgttttataaagctccagctgataactcatcacaaacccaacactcc
aagcaagcccagacaacaaagcagcaagctctgaccagggttcataaccaatggcctcct
gagcaatcatcggtggtcatgtcaggaaagatgcaggggaaagctgctactgccagtgtg
gtatctgttggatatgaggagcaagcagaatcaccttcaggcagcaatacacatgtgact
aacagagctgggtcttcatatgaaactactgagcagcttttggtgaaggcggattgtgag
gagattataataatcagctctgatgatgaggcagatgagctcaactattcagaaatggag
ctttcagacagtgacccaatggaggaatgctacaggatcttcatggaggcaaacaatgag
gaaaaaggaaacgaagctcagcctgacatacctattggagctatggatgtggtgaagccg
gaggtaaacaccccacctcaaacattaagaggaaaaaagagagtagctcatgaagccaaa
cctacagagcagccggtggctaagagtagacctcagccacaggttttggttcctctccgt
gggccagcagcttcaggatttggctcccggccctctatcacttccaagctccagcaggta
cagcagagagcctccatgctgtctgcttcagtcaaaggcggtcaggcttttgtttcctcc
acatgtcaaaataagccagaaacccagagtgcaccttctgctttgactcaaacccctggg
aacctgcagcctgcccttatccaaaatgcttatttgaactacatacctgtgggaactgct
gttgaagtgggcgacaacttgcacctgatcctcccagagggtgccttccctctgcctgtt
gcttccagttccagcccagttactacagtgcttactccaatcagccaaatgcatcagagc
gctttcacagttaaacaaacgtaccatccacctatagttacccctgtgcagagatactgc
tcaacagcacctgtgctcattcctcctccggtacgtaaatcttcactgacctctgctttt
gcatcaacatctttacagtcaagtccagcttcctgtacagttcctcaagcttccgtccag
gctgtgattaagccaatatccactaaacgtaaactgaagcagcagcagtgtgaggccgcc
aaagaaaaagtgccccatgacgtccgccagcgttacgtcagcctgttcacagaggagttc
ctcaaaacaacaggcaatgctaatgatgcctttgaaaaggccctatctgaagagaggact
gtgtacaatcgtagcatgaacaaactcaaatatctgagcattgcagtgaatgcactcaag
aagatgaagaaccaaagcgctgttgctgctaaaggtgaaaatgaagtcaacagccaaaga
ctgaaaggcaacataccacttaacctaaagaagtttaaagcaaacgcagatgacatggca
ttgtatgagagtttgaaggattatattttgacttatgaaaagctgactgagggcaactat
cctgtccagcatccagagagacatggctgtgctattgtttttattgagaataagagagtg
catgcagatcccctcaagaggatctgctgtcgatgtggggcgacatactctgtgagccaa
acaggcaaacacattcgcaaggaggagtgcaattaccattatgggaaagcagttaagaat
agagtgccaggtggagtggagacccgctacagctgctgtgagggagtcatgggaacccct
ggatgtcagatgttcaagttgcatgtccatgattccctcagcctggatgggtttgtgtct
actttgtccagatgtccctcagacaccggctgtcctggtatttactccttggactgtgaa
aagtgttacaccatccatggtttggagctgtccagagtgacagtggtgaactctagtctt
caagtggtctatgacacctttgtcagacctgataatgaagtgattgactacaacaccagg
ttttcaggcatcagtgaagaagatgtaaagggtaaccacacctccctcagagaggtccaa
gagaccttgttgagcttcatcaatgccgacaccattctcattggacatggcctggaaaca
gacctctgtttacttaagttgctccatgggacggtggtggatacatcagtgatcttcccc
caccgtctgggtccccctcacaagctgaccctcaacagcctcacagctgagtacctcagg
aggatcatccaagagagtggtggtttgtggccacgacactgcagaagacgctgctgcttg
catggagctcatgctgtggaaggtcaaagaagatggaaaaatgaaaaaatgccagcaata
aaaccagtctccgctgttcatacatga
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