Amphiprion ocellaris (clown anemonefish): 111580536
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Entry
111580536 CDS
T06018
Symbol
pdzrn4
Name
(RefSeq) PDZ domain-containing RING finger protein 4
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aoce04121
]
111580536 (pdzrn4)
Enzymes [BR:
aoce01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111580536 (pdzrn4)
Ubiquitin system [BR:
aoce04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
111580536 (pdzrn4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
GRASP55_65
Motif
Other DBs
NCBI-GeneID:
111580536
NCBI-ProteinID:
XP_023144084
Ensembl:
ENSAOCG00000026773
LinkDB
All DBs
Position
21:complement(7770894..7815228)
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AA seq
820 aa
AA seq
DB search
MGCNLCTLQKREEHYKLLYEIAQVNGRDFSKAEHDEAVVEAIRRDPIVVQVLRRTPTRAT
AAVVHNHSGEPQDVCVVDVCTQTDITFEHIMALAKLRPATPPVPDICPFLLSDSCHSIHT
MEHEFYECPEYLSNTPAEVERTEEYEYEEVELCRQNSQEKLGLTLCYRTDDEEDTGIYVS
QVEPNSIAARDGRIKEGDRILQINGCEVQDREKAVALLSSEEARSIVLLVTRPEIQLEDD
AAWLDDEQQELVEELKMEILEERRKQKERSFDRRDECQAEEEMTTDTATCSSNNQDSGFG
RSTDSPEHHPLLARFHRRSPAHCLRERWRAEHPHTRRGAGGSQESQGARTLSSSQGHEGV
LSIRNGGGGILGLENRFQQLLELKCQIRNGGECGVYSIRHSIECSLTEQGGGDGDSVDDA
GGEGGVEQELRMLNEELRNIELECQSIMQAHQLRQSHQLEHSQPSPCSPGRSPKDGHKRH
GRLADIHEHPERSDSDKIREKDSSSAYNTAESARSTPLGMERSPDHSLQRHISIANQKNL
RLASSTPSSPIPIPKPQGTANCSRPADPGPVISSSPDQSNPSRSESDPALPADDERCEKK
GRTRDSRRGLPYGSPYQTTPYGQGGSRQLQSYMQLLQQHSSLEYSQSQLSLLSVCRDPVH
RNGRPGEPRLEWKVKVRADGTRYVARRPARDRILRERALRIREERSGGMTTDDDAMSEMK
MGRYWSKEERKQHLARAREQRKRREFMQKSRLECLKEGPASGAEGRKEINILELSHKKMM
KKRNKKILDNWMTIQELMSHGARVPEGSKVHNAFLSVTTV
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcaatttgtgcaccttgcagaaacgggaggaacactacaaactgctgtatgag
attgcacaggtgaacgggcgtgacttctccaaggcggagcatgacgaggcggtggtggag
gccatcaggcgagaccccattgttgtccaggtcctccggcggacacccaccagagccacg
gctgccgtcgtacacaaccacagcggtgagccacaagatgtgtgtgtggtcgacgtctgc
acacaaactgacatcacctttgaacacatcatggcgttggcgaagcttcggccggctact
ccaccggtccccgacatctgtcccttcctgctgtctgacagttgtcattccatccacacc
atggaacacgagttttatgaatgtcccgagtatctgtccaacaccccggcagaggtggag
aggactgaggaatatgagtatgaggaggtggagctgtgcagacagaacagccaggagaag
ctcggcctgacgctgtgctacagaacggacgatgaggaggatacaggcatctatgtcagc
caggtggagccaaacagcatagcagcgagagacggacgcatcaaggagggagatcggatt
ctacagataaatggctgtgaagtgcaggacagagaaaaagctgttgccttgttgtcaagc
gaggaagcaaggagcatcgtactactggtgacgaggccagaaatccagctggaggacgat
gctgcatggctggatgatgagcaacaggagctcgtggaggagctgaagatggagatcctg
gaggagaggaggaagcagaaggagcgtagctttgacaggagagatgagtgtcaagctgaa
gaagaaatgacaacagatacagcaacatgttcctccaacaatcaagacagtgggtttgga
cgcagtacagacagtccggagcaccaccccctgttagcaagattccacaggaggagtcca
gcccattgtctgagggaacgatggagggccgagcatccacacaccaggagaggagctggt
gggtcacaggaaagccagggtgcaagaacactgtcctcaagccaaggccatgaaggggta
ctgagtatccgcaatggtggaggtgggatccttggtttagagaaccgcttccagcaactc
ttggagctcaaatgtcaaatccggaatgggggtgagtgtggggtgtactccatccgacac
agtatagagtgtagccttaccgagcaaggaggaggggatggagatagtgtggatgacgct
ggaggagaaggaggggtggagcaggagttgaggatgctaaatgaagaactacgcaacatt
gagctggagtgccagagcatcatgcaggcccatcaactccgccagtcccaccagctggag
cactcacagccctcgccctgctctccaggacggagccccaaagatggacacaaacgacac
ggcaggctggccgacatccacgaacacccggagaggtcggacagcgataagatccgtgag
aaagacagctccagtgcctacaacacagctgagagtgcacggtcgacaccgctaggtatg
gagagatcacctgaccactctctgcagagacacatcagcatcgccaaccagaaaaacctc
agactggcgtcttctacaccctccagtcccatccctatccccaagccccaaggcacagcc
aattgtagcagaccagcagatcctggtcctgttatctcgagcagtccagaccagagcaac
ccttccaggtctgagtcggatcctgccctgccggcagatgacgagaggtgtgagaagaaa
gggaggactagagattcaaggagggggcttccctatgggtctccatatcagacaactcct
tatggccagggaggatccaggcagctccagagctacatgcagctgctacagcaacactcc
tctctcgagtattctcagagccagctgagtctcctcagtgtctgtcgagatcctgtgcac
cgtaatggacgccctggggaaccacgtctagagtggaaggtcaaagttcgtgcagacggg
acgcgctatgttgcccggagacctgctcgtgaccgtatactgagggaacgagcgctaaga
atcagagaggagcgtagcgggggcatgactacagatgacgatgccatgagcgagatgaag
atgggccgctactggagcaaagaggagaggaagcagcatttggcgagggccagggagcaa
agaaaaaggagggagttcatgcagaagagccgcctcgagtgtctaaaggagggaccggcg
agtggagctgagggcaggaaggagatcaatatcttagagctcagtcacaaaaagatgatg
aagaaacgaaacaagaagatcctagacaactggatgaccatccaggagctgatgagccac
ggggccagagtcccagagggctccaaagtacataacgccttcctttctgtcacaactgtt
tag
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integrated database retrieval system
