Amphiprion ocellaris (clown anemonefish): 111580604
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Entry
111580604 CDS
T06018
Symbol
apex1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
111580604 (apex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aoce03400
]
111580604 (apex1)
Enzymes [BR:
aoce01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
111580604 (apex1)
DNA repair and recombination proteins [BR:
aoce03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
111580604 (apex1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
111580604
NCBI-ProteinID:
XP_023144188
Ensembl:
ENSAOCG00000009649
LinkDB
All DBs
Position
21:complement(23827973..23832757)
Genome browser
AA seq
309 aa
AA seq
DB search
MKRGKNAEDAGAEGDDTGSASAKKTKKTKEPEAPILYDDPPDKMTSKDGRDANMKITSWN
VDGLRAWVKKNGLDWVREEAPDVMCLQETKCGEKALPADITSMPEYPHKYWAVSDEKEGY
SGVGMLCKTEPLKVTYGIGKEEHDKEGRVITAEFPTFYLVTAYVPNASKGLVRLDYRKTW
DEDFRSYLSELDMQKPLVLCGDLNVAHQEIDLKNPKGNKKNPGFTPEEREGFSQLLAAGF
VDSFRELYPEQTNAYTFWTYMMNSRSKNVGWRLDYFLLSSSLVPGLCDSKIRNKAMGSDH
CPITLHIAV
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaggcaagaatgcagaggatgcgggtgcagagggggacgacactggctctgct
tctgcaaagaaaacaaagaagactaaggaaccagaggctcccatattgtacgatgatcct
cctgacaaaatgaccagtaaagatggacgcgacgccaacatgaagatcacctcctggaac
gtggatggactgagggcctgggtgaagaagaatggcctggattgggtgcgtgaggaggct
ccagatgttatgtgcctgcaggagacaaagtgtggagagaaagccctccctgctgacatc
acctccatgcccgagtaccctcacaagtactgggctgtgtctgatgagaaggagggctac
agcggtgtgggaatgctctgcaagaccgaacccctcaaagtgacctatggcatcggtaaa
gaggagcatgacaaggagggccgtgtcatcactgcagagttccccaccttctacctggtc
accgcctacgtgccaaacgccagcaaaggcctcgtgcgcctagattaccgcaaaacctgg
gacgaggacttccggtcttacctgagcgagctggacatgcagaagcccctggtgctgtgc
ggcgacctcaacgtggcacaccaggagatcgacctgaagaaccccaaaggcaacaagaaa
aacccaggcttcacccctgaggagcgcgaaggcttcagccagctgctggcagccggcttc
gtcgacagcttcagggagctctaccccgagcagaccaacgcctacaccttctggacctac
atgatgaactcccgctcaaagaacgtgggctggaggctcgactacttcctgctgtcgtcc
tctctggtgccaggcctttgcgacagcaagatccgcaacaaggcgatggggagcgaccac
tgccccatcactctgcacatagctgtgtag
DBGET
integrated database retrieval system
