Amphiprion ocellaris (clown anemonefish): 111580627
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Entry
111580627 CDS
T06018
Symbol
xrcc4
Name
(RefSeq) DNA repair protein XRCC4 isoform X1
KO
K10886
DNA-repair protein XRCC4
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
111580627 (xrcc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aoce03400
]
111580627 (xrcc4)
DNA repair and recombination proteins [BR:
aoce03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
111580627 (xrcc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRCC4_CC
XRCC4
XRCC4_C
XLF
Kazrin
HAP1_N
BRE1B
DUF3450
DUF3859
DivIC
PH_4
FapA
Motif
Other DBs
NCBI-GeneID:
111580627
NCBI-ProteinID:
XP_023144219
Ensembl:
ENSAOCG00000008649
LinkDB
All DBs
Position
17:complement(22062130..22108157)
Genome browser
AA seq
336 aa
AA seq
DB search
MHTSICEILVSSEPDSSYFLRLDWEGRGLASGFQCMLTDGQTAWRGAVSEAAVCSEAEEL
EMQMERYIRDLQQALTTAESSTSYSFSLTPSPPNHSSAVMLTYEKIEKDLSFRLGCVMLE
AVTEPAEAVRELLTHSLHKGNTLQHHNQKLQEENQRLRREQQRIAAELKRYAHGKEALEA
ELYSRFVLVLNEKKAKIRSLQETVTTLQDTRSSDKQKKTDPVKSDQTPGQDDEYGGSTDE
EPEEVQPTPASNLQSRASSTPSPLDDSLRDITDVAPSRKRRLRHLGALGPTVKRPDPETS
QRTSSDSAGSSKLLTPQRSADAAAASSAVEDLFEDF
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgcacacatcgatatgtgaaatcctcgtctcttcagagcctgactcctcctacttcttg
cgtttggactgggaggggcggggcttagcttcaggcttccagtgcatgctgactgatgga
cagactgcatggagaggggcagttagcgaggcggcagtgtgcagtgaagccgaggagctg
gagatgcagatggagcgctacatccgggacctccaacaggcgctgacaacggcagaaagc
tccacctcctacagctttagcctgacaccaagtccaccaaaccacagctccgcggtaatg
ctgacgtatgagaagatagagaaggacctctcattcaggttgggctgcgtgatgctggag
gccgtcacagagccagcggaggcagtgagggagttactgactcacagtctgcacaaagga
aacactctgcagcaccacaaccagaaactgcaggaggagaaccagagactgagacgagaa
cagcaacgcatcgctgcagagctgaagcgttatgctcatggtaaagaggccctggaggca
gagctgtactctcgctttgtcctggtcctaaacgagaagaaagccaaaatccgcagtctg
caggaaaccgtcactacgctgcaggacacacggagttctgacaagcagaagaagacggat
ccagtgaagtcagaccaaacaccaggtcaggacgatgaatatggaggcagcacagacgag
gagccagaggaggtgcagccgactccagcctccaatttacaatcccgggcttcctctact
ccgagcccattggatgacagcctgcgtgacatcacagatgtggctccatctcgaaagcgt
cgcctccgtcatctcggggctttgggacccacagtgaagagaccggatccagagacatct
cagaggaccagcagcgactctgcagggtccagtaagctgctgactccccagcgctctgca
gatgctgcagcagcaagttcagcagtcgaggacctgttcgaggacttctga
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integrated database retrieval system
