Amphiprion ocellaris (clown anemonefish): 111580774
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Entry
111580774 CDS
T06018
Symbol
nr6a1a
Name
(RefSeq) nuclear receptor subfamily 6 group A member 1-A isoform X2
KO
K08561
germ cell nuclear factor
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aoce03000
]
111580774 (nr6a1a)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
aoce03310
]
111580774 (nr6a1a)
Transcription factors [BR:
aoce03000
]
Eukaryotic type
Zinc finger
Cys4 germ cell nuclear factor
111580774 (nr6a1a)
Nuclear receptors [BR:
aoce03310
]
6. Germ cell nuclear factor
6A. Germ cell nuclear factor receptor
111580774 (nr6a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
111580774
NCBI-ProteinID:
XP_035812416
Ensembl:
ENSAOCG00000003644
LinkDB
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Position
6:complement(8679389..8808275)
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AA seq
484 aa
AA seq
DB search
MEIEKRTNGFDYPERNNAKSVNGFYSEHPLESEHNDSMDDPADQRTCLICGDRATGLHYG
IISCEGCKGFFKRSICNKRVYRCSRDKNCEMSRKQRNRCQYCRLLKCLQMGMNRKAIRED
GMPGGRNKSIGPVQITEEEIERIMSGQEFKEDAPEHTWGNNGDSDHSSPSNGASEGNQPS
PASTLSSNRSVEMNGYTAALRDQYINTSMSTHYQLLPHLFSYAAQSGLLAPQPRSLYPQS
HPLVLQLVAAEDLAPLTTPMLIEDGYKVTQVELFALLCRLADELLFRQISWIKKLPFFCE
LSIEDYTCLLSSTWQELILLSCLTIYSAQIFGDLADVTAKYTPSDDELQGFSEDGMEVME
RLIYLFRKFHQLKISNEEYACMKAINFLNQDIRGLSNISQLEQLNKRYWYVCQDYTEYKY
PHQPKRFPEIMMCLPEIRCIAGKLVNVPLEQLPLLFKAVLHSCKSSLTSYRTGPSPCVTT
SSGN
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggagatagagaagaggacgaatgggttcgactacccggagagaaacaacgccaagtcc
gtgaacggtttttacagtgaacatccattggagtctgaacacaacgacagcatggatgat
ccagctgaccagcgtacttgccttatctgtggagatcgcgccacaggcctgcactatggc
atcatctcctgtgaaggctgcaaaggcttcttcaagcgcagcatctgcaacaagcgtgtg
taccgctgcagtcgcgacaagaactgtgagatgtcgcgcaagcagcgcaaccgctgccag
tactgccgcctgctcaagtgtctgcagatggggatgaaccgcaaagcaatcagggaggat
ggcatgccaggagggaggaacaaaagcatcgggcctgtgcagatcacagaggaggagata
gagaggatcatgtcggggcaggagttcaaggaggacgccccggagcacacctggggcaac
aacggcgacagcgaccacagctctcccagcaacggagcctcggagggcaaccagccgtcg
cccgcctccactctgtcgtccaatcgctctgtagagatgaatggctacacagcagcactc
agggaccagtacatcaacacctccatgtctacacactaccagctcctgcctcacttgttc
agttacgctgcccagtcaggcctgctggccccccagccccgcagcctctacccacagtcc
caccctttagtgctgcagctggtggctgctgaagacctggcccccctgactactcctatg
ctcattgaagacgggtacaaggtaacacaggtggagctgtttgctctgctgtgccgcctg
gcagacgagctgctcttccgtcagatctcctggatcaagaagctgcccttcttctgcgag
ctctccatcgaggactacacctgcctgcttagctccacctggcaggaactcatcctgctc
tcctgccttaccatctacagcgcccagatcttcggagacctggccgatgtcactgccaaa
tacacgccgtctgacgatgagctgcagggattcagtgaagatgggatggaagtgatggag
aggctgatatatctgtttcgcaagttccatcagttaaagatcagcaatgaggagtatgcc
tgtatgaaagccatcaacttccttaaccaagatatcagaggactgtctaacatctcccag
cttgagcagctgaacaagcgctactggtatgtgtgtcaggactacactgagtacaagtac
ccacaccagcccaaacgcttccccgagatcatgatgtgtctgccggagatccgttgcatc
gcagggaagctggtgaatgtccctctggaacagctccccctcttgttcaaagcagtcttg
cactcctgcaaatccagcctgaccagctacaggaccggcccgtcgccctgcgtgaccacc
tcctccggaaactaa
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