Amphiprion ocellaris (clown anemonefish): 111581044
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Entry
111581044 CDS
T06018
Symbol
smarca5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111581044 (smarca5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aoce03021
]
111581044 (smarca5)
03036 Chromosome and associated proteins [BR:
aoce03036
]
111581044 (smarca5)
Transcription machinery [BR:
aoce03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
111581044 (smarca5)
Chromosome and associated proteins [BR:
aoce03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
111581044 (smarca5)
RSF complex
111581044 (smarca5)
WICH complex
111581044 (smarca5)
B-WICH complex
111581044 (smarca5)
NORC complex
111581044 (smarca5)
BRF complex
111581044 (smarca5)
NuRF complex (fruit fly)
111581044 (smarca5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
DBINO
Myb_DNA-binding
AAA_14
Motif
Other DBs
NCBI-GeneID:
111581044
NCBI-ProteinID:
XP_023144797
Ensembl:
ENSAOCG00000015578
LinkDB
All DBs
Position
4:22065641..22077873
Genome browser
AA seq
1036 aa
AA seq
DB search
MSESENCEAQREEQTELEEAGGAEEKSDSSDAGKESSSDAGPDGQDGSSSPSSSKTKDSS
TGYEEKVQTDRTNRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRIKKDEKQNLLS
AGDNRHRRTEQEEDEELLNESTKTTNVCTRFDESPSYVKTGKMRDYQVRGLNWLISLYEN
GINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLYNWMNEFKRWVPSLRA
VCLIGDRDERTALIRDVLLPGEWDVCVTSYEMLIIEKAVFKKFNWRYLVIDEAHRIKNEK
SKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWFDTNNCLGD
QKLVERLHTVLRPFLLRRIKADVEKTLLPKKEIKMYVGLSKMQREWYTKILMKDIDILNS
AGKMDKMRLLNVLMQLRKCCNHPYLFDGAEPGPPYTTDLHLVVNSGKMVVLDKLLPKMKE
QGSRVLIFSQMTRVLDILEDYCMWRNYGYCRLDGQTPHEERQISINAYNEPNSSKFIFML
STRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQQKQVRVFRFITENTVEERI
VERAEMKLRLDSIVIQQGRLVDPSANKLGKDEMLSIIRHGATHVFASKESEITDDDIDAI
LERGERKTMEMKEKLSSLGESSLRNFTMDTENSSVYTFEGEDYREKKKVITNWIEPPKRE
RKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILFYRKTIG
YKVPRNPDMPNSAQVQKEEQAKIDEAEALTEEELEEKENLLQQGFTIWNKRDFNQFIKAN
EKWGRDDIENIAREVEGKTPEEVMEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISI
KKALDSKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKESVYDELRQCI
RNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEREKAEKKKRGPKTGSAQKRK
SEGTPDGRGRRKKLKL
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaagcgaaaactgcgaagcacagcgggaagagcagactgaacttgaagaagcc
ggaggagcggaggagaagtctgactcttcagatgctggaaaagagtcctcctcagacgct
gggcccgatggacaagatgggtcctcttccccctcatcgtccaaaactaaagattctagt
acgggttatgaggagaaagtgcaaacagaccggaccaacagatttgagtatctgctgaag
caaacagagttgtttgctcatttcatccaaccagctgcacagaagacccccacttcccca
ctgaagatgaaaccaggacgtcctcgtatcaagaaagacgagaaacagaacctgctttcc
gccggagacaatcgtcatcgtcgcacagagcaagaggaagatgaggagcttctcaacgag
agcacaaagacaactaatgtgtgcactcgctttgacgaatctccgtcctatgtcaagacg
ggaaaaatgagggactatcaggtccgtggcctgaactggctcatttctctgtatgagaat
ggaatcaatggcatcctcgctgatgaaatgggactgggcaagactctccaaactatttca
ctgctgggttacatgaagcactatagaaatattcctggtccccacatggtactggttccc
aagtccactctctacaactggatgaacgagttcaagcgatgggtgccttctcttcgtgca
gtatgcctgattggagacagggatgaacggactgccctgatcagagatgtgctgctgcca
ggagagtgggacgtgtgcgtcacatcctacgagatgctcatcattgaaaaggccgtgttc
aagaagttcaactggagatacctggtcatcgacgaagctcacaggatcaagaatgagaag
tcaaagctgtcagaaattgttcgtgaatttaagaccaccaatcgtttgctgttgaccgga
acaccactgcagaacaacctccacgagctgtgggctctgctgaacttcctgctgcctgat
gtcttcaactcatcagaagactttgattcctggttcgacacaaacaactgcctgggtgat
cagaagttggttgaacgtctacacactgtgctgcgtcctttcttgcttcgtcgtatcaaa
gcagacgtagagaagactctgctgcccaagaaagaaatcaagatgtacgtgggcctgagc
aagatgcagcgcgagtggtacacaaagattctgatgaaggacattgacattctgaactcg
gcgggcaaaatggacaagatgcgtctgctgaacgttctcatgcagctgaggaaatgctgc
aaccatccgtacctgtttgacggggcggagcctggtcccccctacactactgacctccat
ctggtggtgaacagcggcaagatggtggtgctggacaagctgctgcctaagatgaaggag
cagggttcacgtgtgctcatcttcagtcagatgaccagggtgctggacatcttggaggac
tactgcatgtggaggaactacggttattgtcgcctggatggacagacaccacacgaagag
agacagatctctatcaatgcttacaatgagcccaacagctcaaagttcatcttcatgttg
agcaccagagctggtgggctgggcattaacctggctacagctgatgtagtcattctgtac
gactcagactggaaccctcaggtggacctgcaggccatggatcgagctcacaggattggg
cagcagaagcaggtacgcgttttccgtttcatcactgaaaacactgtggaggaaaggatt
gtggagagggctgagatgaaactgcgtctggactccatcgttatccagcaaggccgactt
gtggatccaagtgcgaacaaactgggcaaggatgagatgctgtccatcatccgccacggt
gccacacacgtgtttgcttccaaagagagcgaaatcacggatgacgacatcgacgcaatc
ctggagcgaggtgaacggaagactatggagatgaaggagaagctgtcgtctctgggtgaa
agctctctgagaaacttcaccatggacacagagaacagcagtgtgtacacattcgaagga
gaggactacagagagaagaagaaggtcattaccaactggatcgagccacccaagagagaa
aggaaagccaattacgctgttgatgcctacttcagagaagccctgcgagtcagtgagccc
aaagcaccaaaggctcctcgtcctcccaagcagccaaatgtccaggacttccagttcttc
cctccacgtctgtttgagcttctggaaaaggaaattctgttctaccggaagaccatcgga
tacaaggttccccgtaatccagacatgcccaactcagctcaggtccagaaagaggagcag
gcaaagattgatgaggccgaggctctcacagaggaagaactggaggaaaaggagaacctt
ctgcaacaaggatttactatttggaacaaacgtgacttcaaccagttcatcaaagccaat
gagaagtggggaagagatgacatcgaaaacatcgccagagaggttgagggcaaaactcct
gaggaagtcatggaatattctgctgtgttctgggagcgctgcaatgagttgcaggacatc
gaaaagatcatggcccagatcgagcgaggagaagccaggattcagagaaggatcagcatc
aagaaagctctggactcaaagattggtcgctacaaggctcccttccatcagctccgtatc
tcctatggcaccaacaaaggcaagaactacacagaagaggaggaccgcttccttatctgc
atgcttcacaagctcggctttgacaaggagagcgtgtacgacgagctccgccagtgcatc
cgcaactcaccacagttccgcttcgactggttcctcaaatccaggactgccatggagctc
cagaggcgatgcaacaccctgattacactgatagagagagaaaacatggagctggaggag
agggagaaggctgagaaaaagaagcgcggcccaaagaccggctcagcccagaaacgaaag
tcagagggaaccccagacggtcgaggacgcaggaaaaagctcaagttgtga
DBGET
integrated database retrieval system
