Amphiprion ocellaris (clown anemonefish): 111581134
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Entry
111581134 CDS
T06018
Symbol
arid1b
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111581134 (arid1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aoce03000
]
111581134 (arid1b)
03021 Transcription machinery [BR:
aoce03021
]
111581134 (arid1b)
03036 Chromosome and associated proteins [BR:
aoce03036
]
111581134 (arid1b)
Transcription factors [BR:
aoce03000
]
Eukaryotic type
Helix-turn-helix
ARID
111581134 (arid1b)
Transcription machinery [BR:
aoce03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111581134 (arid1b)
Chromosome and associated proteins [BR:
aoce03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
111581134 (arid1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
111581134
NCBI-ProteinID:
XP_023144926
Ensembl:
ENSAOCG00000010614
LinkDB
All DBs
Position
12:8179638..8243703
Genome browser
AA seq
2302 aa
AA seq
DB search
MNNVDGHLGGDPGRALGNRNTTAGQSEPRRDSADKRPRGGSNVTDLQTEMLGRHKGKNLG
IGVGAAAAGIGPPPPPSSSSPSSSSHHTPPPFSQFLQQHHHQRQTHNNNIINNNNNIQKG
QGEPRELSSGERRHHGGKEDVLLVGNSRAEERHHQHQLNQSEEEEEEEEEERMDASLGSA
TNSTNNNPPPSGTSSEFNHYYGNGRGGPCFDQHGGQQSPGTGVTAAHSVHNTMDQVQNSH
EGYNNNSPYNHYPNYRPGYGNSGYGGMMSPSRQGNNLMGPGSGSSAAANHSKAAMAATSS
PAGSGGGGGGNGGFQRFPGQGQQQQHPSGATPTLNQLLTSPSPMMRGYGSGYPDYNNPSA
QQQPSMGLAKDMGSQYGSAAHGWGGQQRNHPTMSPGNNGQGSGRSQVPSMDPMAMKRSQL
YGMSSNPYSQQQGAPYPGQPYGSPSPHRYPMGMPGRGQMGMGGMQYPQQQMGSQYSQQQQ
QQQQQQQQQQQQQQQQNMGGYCQPGQPPYFSPPQQQPAAPSQPPYMQPRPLPQQEVPQEA
YGGRGQSAAMTPGKPNHEEMSLSQQERPSSLPDLSGSIDDLPTGTEAAVSSGASGSGSTQ
GDQGTPARSPFSPHVSPRLLPPARTGPSPSPSPSPAGSSSQSRSGPLSPPTSGPGSQLTP
QMSGPGSDVGPHSSQSAMTQDRGFPPSMQRSTAGSQFGPQHSAPPMAPHPAPGGPMHHSS
YQQGSHSFGQYGPPGNYPRPPHYGGAPSANYSGPGPGSGLANSLGLNASSPMHGQGPSTP
AGRGPGPGAGGRPYHTGGNTMAPTSPGMPQPAGQGMGPPGPNTSCKPPEIGPNAGPSANS
SSSTATQSRPPFARSPVYHNQSWLGGRPALSPTLHPSHPPHPQHHHPPLPHPPHHSQQGT
NAQPQPTVQTPPEHYGQGSYPGMTPMGGMGPGGPVGPGGPGGPGGPGGPFSQQPGSNSGR
MTPQGPPYSAPSSGPMMMSAEGMGPHADVKQRVELSKEGVGAATEPPKPKDSYSSQCVSQ
PPTPCPMSPSSASLSSCHGEDSDSISSPAWLRTPTSPKPSVATMTNEKITRLYEMGSEPE
RRLWVDRYLSFMEERGTPVPNLPAVGKKPLDLCRLYLAVREIGGLAMVNKNKKWRELSSL
LNVGTSSSSASSLKKQYIQYLFAYECKVERGEEPPPEAMGPAGESKKPPSLQAKIQPPSP
ANSGSLQGPNTPQSSSSSLTEAPGDLKPPTPASTPHSQMGPQPGNRNIGGVSVQDPFSEG
SDPAFHTKRGPGPGGAPYQQGGGPTDPAMRMQYDANKDPFGGPRKGPGPGEAFGPGQMPS
GAMQDMYPRGPPSGHLTGMGPRPQYPYGPGYERRPDHVIGPDGGMAPPGGQNSMGPSGNE
AGMYPPNRYPHQRHGHDGYGQQYPHSMAYGSHQPLYPQQQGYKRPMEGMYPAAKRHEGEA
FGVQQYSSQQPDMFGPFGGGGGGYMGPERRPVQGQYPYPYSRDRQGPPQHGMMGSGPPTV
SGGPGEGPQANMWHPRTDMGYSYSRQGQGPPYPGMNRGDDQEGRAPQDNQWPPSHLSQRQ
PPFPPHSSSSSSSMPPLPSRQPPSSFQATPTVPNHVSRSHSPSSFPRPLGGSLSPNSAPY
LPSIKKPGLPGAPPGPPPTQGLPLVHREVSFPPASVEATPPKLKPRRRLTAKDTGTPEAW
RVMMSLKSGLLAESTWALDTINILLYDDSTVGSFSLTQLPGFLELIVEFYRRCLIQIFGI
LEEYEVGAEGKKTLLGPLPEEEKEVLKEPPAATLEPDGRSAEEQRIQRRPAIEVEEMQPQ
LAAFQEETTDSKPVVKEAVEVKQEHQEQSEPRPQQASKYDKLPIRVEEKGEEWEEVEQRW
AGLSRPNGFISGLLHWKAGGGDSTTHIQTHFESRMGESALPELLEREGREGGDEGGSPEN
EGCEQGKDEVDGGVDINLADGGETQADKQQDCLSEVRGQRPPVPGEAARSPISHQEDEPR
CWDEAPLSTAESWQDSLAKRCVCISNIVRGLSFIPGNDAVLSRHPGLVLILGRLVLLHHH
HPRRKRTPPTYQREEEQGLACSRDEWWWDCLAALRENTLVTLANISGQLDLSLYPESICL
PILDGLLHWMVCPSAEAQDPFSSAGGFSSLTPQRLVLECLCKLSIQDCNVDLLLATPPFS
RQQKLFSTLVRLVGERKSQVCREMAVAVLSNLAQGDSTAARAVALQKGSVGTLIGFLEDS
VAVAQYQQNPHSLLHATAPTEPPSINMMCRAAKALLAMAKVEENRTEFVLYESRLLDISL
SSALNSSVAAIMCEVLFKIGRS
NT seq
6909 nt
NT seq
+upstream
nt +downstream
nt
atgaataatgtagatggacatcttggaggagatccaggccgggctctggggaacagaaac
accaccgctggacaaagtgaaccacgcagggacagcgcggataaaaggccgaggggcggc
tctaatgtgaccgacttgcagacggagatgctcggcaggcataaagggaaaaacctcggt
attggtgtcggagctgcagctgctggtattggacctcctcctcctccatcatcatcatca
ccatcatcatcatcccaccacacacctccgccgttcagccagtttctccagcagcatcac
caccagcggcaaacccacaacaacaacatcataaacaacaacaacaacatccagaagggt
cagggagagccgcgggaactgagcagcggcgagcggcggcaccatggaggaaaagaagac
gtcctcctggtggggaacagccgagcagaggagcgccatcaccaacaccagctgaatcaa
agcgaggaggaggaggaggaggaggaggaggagcggatggatgccagcctgggatcagcc
accaacagcaccaacaacaaccctcctccgagtgggaccagctccgagtttaatcattat
tatgggaatggaagaggagggccttgctttgatcaacatggcggacaacaaagcccaggg
actggggtaacagcggcgcactcggtacacaacactatggatcaggttcagaactcccac
gaaggctacaacaacaacagcccgtacaaccactacccgaactaccgacccggctacggg
aatagtggatatggaggcatgatgagtccctcgcgccaggggaataacctgatgggcccg
ggcagcggcagctcggccgctgctaaccacagcaaagcggctatggctgctaccagctcc
ccggctggaagcggaggtggcggcggaggcaacggaggatttcagcggttccccggacag
gggcagcagcagcagcacccttcgggggctacaccgactttgaaccagttattgacgtct
ccgagcccgatgatgcgaggttatggaagtggatatccagattataataatccttctgca
caacaacagccgagcatggggctggctaaagacatgggctcccagtacggctcggctgct
catggctggggaggacaacaaagaaatcaccccaccatgagcccggggaacaacgggcag
ggcagcggcaggtcccaggtgccgtccatggacccgatggcgatgaaacgctctcagctc
tacggaatgagcagcaacccgtactcccagcagcagggggcaccgtaccccggccagccc
tacggctccccctcgccacatagatacccaatggggatgcccggcagagggcaaatgggg
atgggagggatgcagtaccctcagcaacagatgggctctcagtacagtcagcagcaacag
cagcagcagcagcagcaacagcagcagcagcagcagcagcagcagcagaacatgggcggc
tactgtcagccgggtcagccgccgtacttcagccctccccagcagcagcccgccgccccc
agccagccaccgtacatgcagccccgcccactgccacagcaggaggtgccacaggaggcg
tatgggggacggggccagtctgctgctatgactcctgggaaaccgaaccacgaagagatg
agtctgagccaacaagagagaccatccagcttgccggatctgtccggctccatcgatgac
ttgcccaccggcaccgaagcggcggtgagttcaggggcgtcgggctcaggcagcactcag
ggcgaccaggggactccggcccgttcgcctttctcaccccacgtctcaccccggctcctc
ccgccagctcgcaccgggccctctccctccccctctccatcgcccgctgggtccagcagc
caatcacgatcaggaccattgtccccccccactagtggaccaggctctcagttgactcct
cagatgtctggtcctggatcagatgttggtcctcattcctcccagtctgccatgactcag
gacagaggtttcccaccctccatgcagcgcagcaccgcggggtcccagtttggtccccag
cactctgcaccacccatggctcctcacccagccccagggggtcccatgcaccacagctcc
taccagcagggcagccactcctttggccagtatggacccccaggtaattatcctcgcccc
ccccactatggcggggcccccagtgccaattacagtgggcccggcccaggctctggcctg
gccaacagcctggggttgaacgccagcagccccatgcacggtcagggcccttccaccccg
gcaggtcgtggccctgggcctggtgctgggggccggccttaccacactggaggcaacacc
atggcccccacctcccccggcatgccgcagcctgccgggcagggcatgggacctccaggg
cccaacaccagctgcaaaccacctgagattggccccaacgctggaccaagtgccaactcc
tcgtcctcgactgccacccaaagcaggcctcccttcgctcgctcgcccgtctaccacaac
cagtcctggctcgggggtcgacccgccctctctcctacccttcacccctcccaccctcct
caccctcagcaccatcatcctcctcttcctcaccctcctcaccactcgcaacagggcacc
aatgctcagccccagcccaccgtgcagaccccccctgagcattatgggcagggcagctac
ccgggcatgacgccgatgggtggaatgggccctggaggccctgtaggccctggaggccca
ggtggtcccggaggtcctggaggtccttttagccagcagccaggcagtaactctggcagg
atgacgccacagggacccccctacagtgccccatcatcagggcctatgatgatgtcagca
gaagggatgggtcctcacgcagatgtcaagcaaagagttgagctcagtaaagagggagtt
ggcgctgccaccgaaccacccaaacccaaggacagctacagctctcagtgtgtgtcccag
ccccccaccccctgccccatgtcccccagctcagctagtctgtcctcctgtcacggggag
gacagtgatagcattagcagccccgcctggctcaggactccgaccagccccaagcccagc
gtggccaccatgaccaacgagaagatcacccggctgtatgagatgggctccgagccagag
agaaggctgtgggtggatcgctacctgtccttcatggaggagagggggacgcccgtccca
aacctgcctgccgtcggaaagaagccgctggacctctgcagactgtacctggctgttcga
gagatcggaggactggccatggtcaataagaataagaagtggagggagctgtcgtccctg
ttgaacgtggggacgtccagcagctcagccagctctctcaagaagcagtacatccagtac
ctgttcgcctacgagtgcaaggtggagcgaggggaggaacctccacctgaagccatgggg
ccagctggagaaagcaagaaacctccttccctccaggccaagattcagccaccctcccca
gccaactcaggctctttacaaggccccaacaccccccagtccagcagcagctccctgacc
gaggcccccggagacctgaagcccccaacacccgcctcgaccccgcacagccagatgggc
ccccagcctggaaaccggaacattggaggagttagtgtccaggatcccttctctgaaggc
agcgatccagccttccacaccaagcgaggcccaggacccggcggcgccccctaccagcag
ggaggaggtccaacagaccccgccatgaggatgcagtatgatgccaacaaagacccgttc
ggaggaccgaggaagggtcctgggcccggcgaagccttcggtcctggtcagatgcccagt
ggtgccatgcaggacatgtacccccgtgggccgccatccgggcacctgacagggatgggt
cccagaccacagtatccctacggccctggctatgagcggagaccagaccatgtgattggt
ccagacggaggcatggcgccccctgggggacagaacagcatgggtccatctggaaacgag
gctggcatgtatcctcccaacagatacccccaccagaggcatggacacgatggttatggg
cagcagtatcctcacagcatggcctatggttcccatcagcccctgtatcctcagcagcag
ggctacaagcgtcccatggaggggatgtatcctgctgccaagcgtcatgagggggaggcc
ttcggtgtgcagcagtacagctcacagcagcccgacatgttcggaccttttggaggagga
ggtgggggctacatgggccctgagcgccggcctgtccagggacagtatccatatccatat
agccgagaccgacaggggcccccgcagcacggtatgatgggctcaggaccgccaacggtg
tctgggggtcccggggagggtccacaggccaatatgtggcaccccaggacagacatgggt
tactcatacagccgacagggtcaggggcccccctaccctggcatgaaccgaggggacgac
caggagggcagggcccctcaggacaaccagtggccccccagtcacctaagccagcgccaa
cctccctttcccccccactcttcctcctcttcatcctccatgccccctctgccttccaga
cagcccccctcctcctttcaggccacacccaccgtccctaaccatgtaagccgctctcac
agcccctcctccttcccccgaccactgggaggctctctgtcccccaacagtgccccatac
ctgccctccatcaagaagccggggctgccaggtgccccgccggggcccccacccactcag
ggcctccccctcgtccacagagaagtcagctttcccccagcctctgtggaggccacgccc
cccaaactgaaaccacggcgacgactgaccgccaaggacacaggaaccccagaggcgtgg
cgggtgatgatgtcactgaaatctggcctattagcagagagcacctgggcgttggacacc
atcaacatcctgctgtatgacgacagcactgtgggctccttcagcctcacacagctgcct
ggtttcctggagctcatcgtggagttttatcgccgctgcctcatccagatctttggtatc
ctggaggagtatgaagtgggagctgagggcaagaagaccctgctgggacctctgcctgag
gaggagaaggaggtgctgaaggagcctccagctgcgacccttgaacctgacggccggtca
gcggaggagcagaggatccagaggaggcctgcgatagaggtggaggagatgcagccgcaa
ctcgcggcttttcaagaggagacgacagacagcaaacccgtcgtcaaggaagcggtggag
gtgaagcaggagcatcaggagcagtcagagccccgcccacaacaggccagcaagtacgac
aagctgccaatcagggtggaggagaagggggaggagtgggaggaggtggagcagcgctgg
gccggactcagccgacccaatggcttcatcagcggcctcctgcactggaaggctggagga
ggagactccaccactcacatccagacacattttgagtcccgcatgggagagtctgctctc
cccgagctgctggagagggaggggagggagggaggagacgaaggggggagtccagaaaat
gagggatgtgagcagggtaaggacgaggtggacggaggcgtggacataaacctggcagat
ggaggtgaaacgcaagctgacaaacaacaagactgtctgtcagaggttagaggtcagagg
ccaccggttcctggtgaggcggctcggagtcccatcagccatcaggaggacgagcctcgc
tgctgggacgaggctcctctgtccacagccgagtcctggcaggactctctggctaaacgc
tgcgtctgcatctccaacatcgtgcgtggcctctctttcatccccggcaacgatgccgtc
ctgtcgcggcaccccggtctggtgctgatcctgggccgcctggtgctgctgcatcaccac
cacccccgcaggaaacggacacctcccacctaccagcgggaggaagagcagggtctggcc
tgcagccgggacgagtggtggtgggactgcctggcggcgctcagggagaacacgctggtg
acgctggccaacatctcgggccagctggacctgtcactgtaccctgagagcatctgcctg
cccatcctggacgggctgctgcactggatggtgtgtccgtccgctgaggcccaggacccc
ttctcctcggcgggcggcttctcgtcgctcactcctcagagattggtgctggagtgtctg
tgcaagctgagcatccaggactgcaacgtggacctgctgctcgccacgccgcctttcagc
cgccagcagaagctcttctccacgctggtgcgcctggtgggtgagaggaagagccaggtg
tgccgggagatggcggtggccgtcctgtccaacctggctcagggcgactccacagcggcg
agggctgtggccctgcagaagggcagtgtaggcactctgattggtttcctcgaggacagc
gtcgccgtggctcagtaccaacagaatccacacagcctgctgcacgccacggccccaacg
gagccgcccagcatcaacatgatgtgccgcgctgccaaggcgctgctggccatggcgaag
gtggaagagaaccggacggagtttgttctgtatgagagccggctgctggacatttcgctt
tcgtccgccctcaactcctctgtggcggccatcatgtgtgaagtactgtttaaaatcggc
cgctcgtga
DBGET
integrated database retrieval system
