Amphiprion ocellaris (clown anemonefish): 111581195
Help
Entry
111581195 CDS
T06018
Symbol
nop56
Name
(RefSeq) nucleolar protein 56 isoform X1
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aoce03000
]
111581195 (nop56)
04121 Ubiquitin system [BR:
aoce04121
]
111581195 (nop56)
Transcription factors [BR:
aoce03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
111581195 (nop56)
Ubiquitin system [BR:
aoce04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
111581195 (nop56)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOP5NT
Dimer_Tnp_hAT
DUF659
DBD_Tnp_Hermes
Motif
Other DBs
NCBI-GeneID:
111581195
NCBI-ProteinID:
XP_054866441
Ensembl:
ENSAOCG00000007395
LinkDB
All DBs
Position
5:complement(20351768..20362317)
Genome browser
AA seq
779 aa
AA seq
DB search
MWHFVKRAVSVFFPKYSGRADVQCGRCGDFLIMVVLHVLFEHAAGYALFAVKEVEEIGML
LPQVEESVLSLAKFNSMVSLAAFFPFKSAQAALENMNAIFAGVVHADLKLFLETNLPLSG
KKKPSLGVSDAKIGAALQEEFNISIQTGGVVAEITRGVRLHFHSLVKGLTALAASKAQLG
LGHSYSRAKVKFNVNRADNMIIQSIALLDQLDKDINTFSMRVRAKKVRSSSVDGSVTKPA
TCTPQQANVLTKSILNMLVTDMRPLSMVDDEGFKEMIKQFNPDYHDNYLPDRSHFTTLME
TKYHATFEKVKETLRGINSFLTLTADVWTSHATEAYLEVSCHFLSEDWTMKTFNLSTMPL
EEWHTGANIMTWMEEVLAKFDILPTKIKAVVHDSGSNMVAAMRLLEEKHGWASIGCAGHT
LQLIVNTALKETTISRALGAARQLVEHFKRSELASTKLEMKREQMMVEQNALIQDVGTRW
NSTFYMIERLLEQRWPLTATLLDPEVTPKGKHYFDLKPEQWELLEELKQGLAPFETATVY
LSGQQYTTISGLPQVVKELTQAVHQSQFETSSGKSFISSAEKGLTERWGSICTISGDNES
PVLLAAALDPRYRKLKFLTPEDGIRLQGSIEVLAVKEAKTTGTQDAKLQRANGSGRKSAL
ETLLQSDTDSFSENEGGESEEDRKIQVVMNEVRLYFGEASLPEKEDPLRWWSENEERFPT
LSKLAKSFLCIPATSTPSEQIFSAAGNICSQKRASLCPRHVEMLTFLAMNKSLMQFGII
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgtggcactttgtgaaacgtgcagtctccgtctttttcccgaagtacagcggcagggct
gacgtgcagtgcggccgctgcggagattttctaatcatggtggtgttacacgtgttgttc
gagcatgcggcgggctacgcgctgttcgccgtcaaagaggtggaggagatcggcatgctg
ctccctcaggtggaggagagcgtgttgagcctggcaaagttcaacagcatggtgagcctg
gctgccttctttcccttcaagtcggctcaggctgccctggagaacatgaatgccattttt
gcaggtgtggttcacgctgacctgaagttgtttttggagacaaacttgcccctttctggg
aagaagaaaccttccttgggggtttccgatgccaaaattggagcagctttacaagaagag
tttaacatctctatccaaactggtggcgtggtagctgagataacaagaggtgtgcggttg
cacttccactccctggtgaagggtctgactgccctggcagcatccaaggcacagctcggt
ctcggccacagctactccagagctaaagtaaagttcaacgtcaacagggccgacaacatg
atcatccagtccattgctctgttggatcagctggacaaagacatcaacactttctctatg
cgtgtgcgtgctaaaaaagtacgttcttcttcagtggacggctctgttacaaagccagct
acatgcacacctcagcaagcaaatgtcctcactaagtccatactgaacatgttggtgacg
gacatgagacccctgtccatggtggacgatgaagggtttaaagagatgattaaacagttc
aacccggattatcatgacaactacctaccagacagatcccacttcaccacattgatggag
acgaagtatcatgcaacctttgagaaggtaaaggagaccctcaggggcatcaacagtttc
ctcacactgactgctgatgtgtggaccagtcatgcaacagaggcttaccttgaagtgtct
tgccatttcctgagtgaagattggacgatgaagaccttcaacctttccaccatgcctctt
gaggagtggcatactggtgcaaatataatgacatggatggaagaggttttagcaaagttt
gacatcttgcccaccaagataaaagcagtagttcatgacagtggttccaatatggtggca
gcaatgcgactgcttgaagaaaaacatggatgggcctctatcggctgtgctggacacaca
ctccagctcatagtcaacactgctctcaaagaaaccaccatcagcagagcactaggtgct
gctaggcagctagtggagcactttaagagaagcgagctggccagtacaaagttagagatg
aaacgggaacaaatgatggttgagcaaaatgcactgatccaggatgtcggtacaagatgg
aacagtacattctacatgattgaaagactccttgaacagcgctggcctctcactgccact
ctgttagatcctgaggtaactccaaaggggaaacactactttgacctgaagccagagcag
tgggagctgcttgaagaattgaagcaagggttggcaccttttgagactgctactgtttac
cttagtggacagcagtacacaaccatttcaggtcttccacaggtggtcaaagagctgaca
caggctgtacaccaaagccaatttgagacaagctcaggaaaatccttcatttccagtgca
gaaaaagggctaacagagagatgggggagtatttgcactatctcaggagacaacgaaagt
ccagttcttcttgcagctgccttggacccgagatacagaaagctgaagtttctgactcct
gaagatggcatcagactgcaggggagtattgaagtgcttgctgtcaaagaagcaaaaacg
actgggacacaggatgcaaaactgcagagggccaatggttcaggtagaaagagtgctctg
gaaacccttcttcagtctgacacagacagtttcagtgaaaatgagggtggagaatctgag
gaggacagaaagatccaagttgtgatgaatgaagttcggctgtactttggagaggcctca
ctccctgaaaaggaggatccactgagatggtggagtgaaaatgaggagcgtttccccaca
ctgtcaaagctagctaaatcttttctgtgcattccagcaacctccaccccatcggagcag
attttctctgcagcagggaacatctgctctcaaaagagagcaagcctttgtccaagacat
gtagaaatgctaactttcctggctatgaacaagagtcttatgcagtttgggattatatag
DBGET
integrated database retrieval system
