Amphiprion ocellaris (clown anemonefish): 111581246
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Entry
111581246 CDS
T06018
Symbol
snrpa
Name
(RefSeq) U1 small nuclear ribonucleoprotein A
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111581246 (snrpa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aoce03041
]
111581246 (snrpa)
Spliceosome [BR:
aoce03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
111581246 (snrpa)
Complex B
111581246 (snrpa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
DUF4523
xRRM
Motif
Other DBs
NCBI-GeneID:
111581246
NCBI-ProteinID:
XP_023145120
Ensembl:
ENSAOCG00000005919
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All DBs
Position
7:4374603..4377482
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AA seq
282 aa
AA seq
DB search
MATAEVRLNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVARYLKMKGQAFVIFK
EVNSASNALRSMQGFPFYDKPMRIQYAKQDSDIIAKMKGTYVERDRKKEKKKPKGTEGGG
AKKGVPGGAAPMVAGVPAAMPGMPPMSQAPRMMHMPGQPPYMPPPGMMPPPGMAPGQIPP
GAMPPGQMMPGQMPGQMPQQVAENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV
PGRHDIAFVEFENEVQAGAARDALQGFKITQTNAMKISFAKK
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgcggaggtacgactaaaccatacgatctacatcaacaacttgaatgagaaa
atcaagaaagatgagttgaaaaagtcgctgtacgccatcttctcgcagtttggacagatt
ttggacatcttggtggcacgatacctgaagatgaagggtcaggcgtttgtcatttttaaa
gaggtcaacagcgcctctaatgcactgagatccatgcagggtttcccgttttatgacaaa
ccaatgcggatccaatatgccaagcaggactctgacattatagctaaaatgaaggggact
tatgtggagcgtgaccgtaaaaaagagaagaagaagcccaaaggaactgaaggaggagga
gctaaaaaaggtgtaccaggaggtgctgcacccatggttgctggggtacctgctgctatg
cctggaatgcctcccatgagccaggctccccgcatgatgcacatgccaggccagccgcct
tacatgcctcctccaggcatgatgcctcctccagggatggcaccgggtcagattcctcct
ggtgccatgcctcctggtcagatgatgcctgggcagatgcctggacaaatgcctcagcag
gttgcagaaaatcctcccaatcacatcctcttcctcaccaacctgccagaggagacaaac
gagctcatgctctccatgctcttcaaccagttcccagggttcaaagaggtgcgtttggtc
cccggtcgccacgacatcgcctttgtggagtttgagaatgaggtgcaggctggtgctgca
cgagatgccctccaaggcttcaagatcacacaaaccaacgccatgaagatctcttttgct
aagaagtaa
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