Amphiprion ocellaris (clown anemonefish): 111581294
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Entry
111581294 CDS
T06018
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aoce03041
]
111581294
Enzymes [BR:
aoce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111581294
Spliceosome [BR:
aoce03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
111581294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
111581294
NCBI-ProteinID:
XP_023145185
Ensembl:
ENSAOCG00000004874
LinkDB
All DBs
Position
4:30037675..30048649
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AA seq
648 aa
AA seq
DB search
MRGGSSYGDRDRDRGRDRPRFGAMSGRGGPPPMKFGNPGERLRKKRWNLDELPKFEKNFY
TEHPDVQRMTQYEMEEFRRKKEITVRGSGCPKAVTAFHHAQFPQYVMDVLMQQNFKEPTA
IQAQGFPVALSGKDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTREL
AQQVQQVAYDYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNL
RRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRQLAEDFLRDYVQ
INVGALELSANHNILQIVDVCVETEKDNKLIQLMEEIMAEKENKTIIFVETKKRCDDLTR
RMRRDGWPAMCIHGDKSQPERDWVLTEFRSGKAPILIATDVASRGLDVEDVKFVINYDYP
SSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARDLVRVLEEARQAINPKLLQLVDSGR
GGGGGGRMRYRGSNSSNPNLMYQEECDRRMRSGGGSKDGRSSFNRDSRNSRDGDRSSSSY
RDRSRDHRNSYNSGSDHYQSYSSSGGGYNSRGGGHSGGGGGGPGQSSQPQGQFGQAPPPP
PPPSGGPQPLMAQQFAPPQPPLMGFMGQPPYPFVSPPPTPPGVPPPRK
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgagaggaggttcctcctatggagacagagaccgagaccgtgggcgagataggccacgg
tttggggccatgagcggtcgtggcggacccccaccaatgaagtttggaaatccaggtgag
cgtctccgcaagaagaggtggaacctggacgagctgccaaaatttgagaagaacttctac
actgaacaccctgatgtccaacgcatgactcaatatgagatggaagagtttcgccgaaaa
aaggagatcaccgtcagaggctctggttgtccaaaggctgtcactgcttttcaccatgca
cagtttcctcagtatgtgatggatgtgttgatgcagcagaatttcaaggagccaacagcg
atccaggctcagggattccctgtggccctgagtggcaaggacatggtgggaattgcacag
actggctctggaaagacgctggcttatcttcttcctgctattgtacacatcaatcaccag
ccctatctggagagaggagatggcccgatatgtctggttctcgctccaaccagagagctg
gcccagcaggttcagcaggttgcatatgactatggaaagtcttcccgtatcaaaagcacc
tgtgtgtatggtggagctcccaaaggaccacagattcgagatcttgagaggggtgttgag
atctgcatcgccacacctggccgcctcatcgacttcttggaggcagggaagaccaacctg
cgccgctgcacctaccttgtgctggatgaggctgaccgcatgttggacatgggttttgaa
ccgcaaattcgtaagatagttgaacagatcaggcctgacagacagactctgatgtggagt
gcaacttggccaaaggaggttcggcaacttgccgaggacttcctgagggactatgtccag
attaatgttggcgctctggagctcagtgctaaccacaacatcctgcagatagtcgatgtc
tgcgtggagacagaaaaggacaacaaacttattcagctgatggaggagataatggctgaa
aaggagaataaaacaatcatctttgtggagactaagaaacgttgtgatgatcttacaagg
aggatgaggcgtgatggatggccagccatgtgtatccatggagacaagagccagccagaa
agagactgggtgctcacagaatttcgcagtggcaaagcccccattctgattgctactgat
gttgcttctcgtggtctggatgtggaagatgtcaagttcgtcatcaactatgactatcct
agctcctccgaggattatgtccatcgtattggacgtacggcccgcagtaccaacaaaggc
actgcctacaccttcttcacaccaggaaacctgcgacaggcccgagaccttgtccgtgtt
ttggaggaggcccggcaagccataaatcctaaactgcttcagctcgtggactctggtcgt
ggaggaggaggtggtggcagaatgcgttaccgtggcagcaactccagcaaccctaacctg
atgtatcaggaggagtgcgatcggcgcatgcgttcaggcggcggcagcaaagatggccgc
agcagcttcaaccgtgacagtcgcaacagccgtgacggagaccgttcctcttcctcctac
agggacagaagtagggatcacagaaacagctacaactcgggctcagatcactaccagagc
tacagcagcagtggtggcggctataactcccggggtggaggccactctggaggtggcggt
ggaggtcctggtcagtccagccagccgcagggtcagtttggccaggctcctcctcctcct
cctccaccgtcaggggggccgcagcctctgatggctcagcagtttgctccaccacagcct
ccactcatgggcttcatggggcaaccgccataccctttcgtgtctcctcctcctactcct
ccaggtgtgccgccaccccgaaagtag
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