Amphiprion ocellaris (clown anemonefish): 111581309
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Entry
111581309 CDS
T06018
Symbol
vldlr
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aoce04131
]
111581309 (vldlr)
Membrane trafficking [BR:
aoce04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
111581309 (vldlr)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
EGF
Motif
Other DBs
NCBI-GeneID:
111581309
NCBI-ProteinID:
XP_023145208
Ensembl:
ENSAOCG00000004403
LinkDB
All DBs
Position
17:complement(30681508..30763683)
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AA seq
863 aa
AA seq
DB search
MVTSTPGILLLLVCLQHRFINVHGTKTECEASQFQCGNGRCIPSVWQCDGDEDCTDGSDE
NSCVKKTCAEVDFVCHNGQCVPKRWHCDGEPDCEDGSDESLEICHMRTCRMNEFSCGAGT
TQCIPIFWKCDGEKDCDSGEDEVNCGNITCAPNEFTCASGRCISRNFVCNGEDDCGDGSD
EVECAPSSCGPSEFQCGNSSCIPASWVCDDDVDCQDQSDESPSRCGRHPTPPAKCSSSEM
QCRSGECIHKKWRCDGDPDCKDGSDEANCPVRTCEPDQFKCDDGNCILGSRQCNGLRDCS
DGSDEANCKNMTQCNGPEKFKCRSGECIEMSKVCNKARDCPDWSDEPIKECNLNECLLNN
GGCSHICKDMVIGFECDCTPGLQLIDHKTCGDINECLNPGICSQICINLKGGYKCECHNG
YQMDPTTGVCKAVGKEPCLIFTNRRDIRRLGLERKEYTQIVEQQRNTVALDADFNQQMIF
WADLGQKAIYSTVLDKRGDVGSHKKVIDNVQIPVGIAVDWIYKNLYWSDLSTKTISVANF
NGTKQKILFNRGLKEPASIAVDPLSGFLYWSDWGEPAKIEKSGMNGVDRQVLVATDIQWP
NGITLDLIKGRLYWVDSKLHMLCSVDLNGDNRKKVLQSSDYLAHPFALTVFEDRVFWTDG
ENEAIYGANKFTGSDVVTLASNLNDPQDIIVYHELIQLSGTNWCTEKGENGGCSYMCLPA
PQINKHSPKYTCVCPKGQELAADGLRCRPDPSTKGPAKDDGKALIQPPQEANVSTSIQVN
ATAKGSAAAWAILPVLLLAMAAAGGYLMWRNWQLKNQKSMNFDNPVYLKTTEEDLNIDIT
RHGANVGHTYPAISIVSTDDDLS
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggtcacgtccacaccggggatcctcctgctgctcgtgtgtctccagcaccggtttatt
aacgtccacggtactaagacagaatgtgaagccagtcagtttcagtgtggaaacggccgc
tgcatcccgtccgtgtggcagtgtgacggagacgaggactgtaccgacggcagcgacgag
aactcctgtgtcaagaagacttgtgcagaggtggactttgtgtgccacaatggccagtgt
gtaccgaagaggtggcactgcgatggggagccggactgcgaggacgggtcggacgagagc
ctagaaatctgccacatgaggacgtgccgaatgaacgagttcagctgtggagcaggaacc
acccagtgtattcccatcttctggaagtgtgacggagagaaggactgtgacagcggagag
gacgaagtcaactgtggtaacatcacctgcgccccaaacgagttcacgtgtgccagcggt
cgttgcatctcccgaaacttcgtgtgtaacggcgaggacgactgtggcgacggctcggat
gaggtggaatgcgctccgtcctcctgcggtcccagcgagttccagtgtggaaactcgtcg
tgcatcccggccagctgggtttgtgacgacgacgtggactgccaggaccagtcggatgag
tctccgtctcgatgcggtcgccatccgacgccgccggccaagtgttcgtccagcgagatg
cagtgccgctcaggagagtgcattcacaagaagtggaggtgtgacggagatcctgactgc
aaggacggcagcgacgaagccaactgtcctgttcgcacctgtgagccggatcagttcaaa
tgcgacgatggaaactgtatcctgggcagccgacagtgtaacggcctcagagactgctca
gacggatcggatgaagccaactgcaaaaacatgactcagtgcaacggaccggagaagttc
aagtgtcgcagtggggaatgcatcgagatgagcaaagtgtgcaacaaggccagagactgt
ccggactggagtgatgaacccatcaaggaatgcaatctgaatgagtgtctcctgaacaac
ggtggctgctcccacatctgcaaagacatggtgattggcttcgagtgtgactgcacccct
ggactccagctcatagaccacaagacctgcggagacataaacgagtgtctgaatcctggc
atttgcagtcagatctgcatcaacctgaagggaggatacaagtgtgaatgccacaacggc
taccagatggatccgaccaccggcgtctgcaaggctgtcggtaaggagccctgcctgatc
ttcactaaccgacgagatatccgccgcctgggtcttgagaggaaggagtacacccagatc
gtggagcagcagaggaacaccgtggctctggacgctgactttaaccagcagatgattttc
tgggccgacctgggccagaaggctatttatagcaccgtgctggataaacgtggggatgtc
ggcagccacaagaaagtgatcgacaacgtccagatcccggtgggaatcgccgtggactgg
atttacaagaacctgtactggtccgatctcagcaccaaaaccatttctgtcgccaacttt
aacggcaccaagcagaaaattctgttcaaccgcggcctcaaagaaccggcctccatcgcc
gtggatccgctgtccgggtttctgtactggtctgattggggcgaaccagccaagattgag
aaatctggtatgaacggagtggaccgacaagttctggtggcgacagatatccagtggccg
aatggaatcactctagatctgatcaaaggcaggttgtactgggtcgactccaagctgcac
atgctctgtagcgtcgacctgaacggagacaacaggaagaaagtgctgcagtcttcggac
tatctggctcatcccttcgctctcactgtttttgaggatcgagtcttctggacagacggt
gaaaatgaagccatctacggtgcaaacaagttcaccggatccgatgtggtgacgctggcc
agcaacctgaacgacccccaggacatcatcgtttaccacgagctgattcagctgtcaggc
actaactggtgcacggagaaaggtgaaaatggaggctgcagctacatgtgtctgcctgca
ccgcaaatcaacaaacactcccccaaatacacctgtgtgtgtccaaagggtcaggagctg
gctgccgacggcctccgctgcagacctgacccttctaccaaaggtcccgcaaaggatgat
gggaaagctctaatacaaccaccccaagaagccaacgtcagcacatcgatccaggtgaac
gctacagccaaaggctctgctgctgcctgggccatactgccagtcttgctgctggcgatg
gcggcagcaggcggctacctgatgtggaggaactggcagctgaagaaccagaagagcatg
aacttcgacaaccccgtctacctgaagaccacagaagaagacctcaacatcgacatcacc
cggcacggcgccaacgtgggacacacctaccccgcgatttcgatagtgagcacagacgat
gatttatcctga
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