Amphiprion ocellaris (clown anemonefish): 111581398
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Entry
111581398 CDS
T06018
Symbol
trpc1
Name
(RefSeq) short transient receptor potential channel 1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aoce04040
]
111581398 (trpc1)
Ion channels [BR:
aoce04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
111581398 (trpc1)
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
MTR4-like_stalk
LHD_TRPY1
TALPID3
Motif
Other DBs
NCBI-GeneID:
111581398
NCBI-ProteinID:
XP_023145312
Ensembl:
ENSAOCG00000003538
LinkDB
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Position
22:17390940..17408111
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AA seq
796 aa
AA seq
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MHISVWPYSLSVVMAALYQGTDASSPDKFLALKDVREVKEETTLDEKLFLLACEKGDYYM
VKKLLEENRHGELNINCVDVLGRDAVTIAIENENLDILQLLLEHGCQATDALLVAIDSEV
VGAVDILLNHRPRRSSKPSIAKLMQRIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQD
ISLPRPHAVGCECTLCNAKNKKDSLRHSRFRLDIYRCLASPSLIMLTEEDPILRAFELSA
DLKELSLVEVEFRNDYEELAKQCKMFAKDLLAQARNSRELEVILNHTSSDDHVDKRGLLE
ERMNLSRLKLAIKYNQKEFVAQSNCQQFLNTVWFGETASYRRKHTCLKMATVLSVAMLWP
LLSVCYLLVPRSRVGQIIHTPFVKFIIHSASYFTFLLLLNLYSLVYNEGKQNTMGPALEM
IDYLLILWIIGMVWSDVKRLWYVGLEDFLEESRNQLSFVMNSLYLATFALKIVAHSKFKN
AQDTDRKNWDAFHPILVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQEFGKF
LGLFLLVLFSFTIGLTQLYGKDQKDPDKNQTKDCEGIFCQQQSNDAFHTFMGTCYALFWY
IFSLAHVALFVTRISYTEELRSFVGAMIIGTYNIVVVIVLTKLLVAMLHKSFRQIANHED
KEWKFARAKLWLSYFDDKCTLPPPFNILPSPKTVCYLLTSMSKWICSHTSKGKVKRQNSL
KEWKNLKQKRDENYQKIMCCLVHRYLTSTRQKMQSTDQATVENLNDLRQDLSKFRNEMRD
LLGFRTSKYAMFYPRS
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcagtgtttggccgtactcgctctccgtcgtaatggcagctctgtaccagggc
acggacgcttcctctccggacaaatttctggccttaaaggacgtgagagaagtgaaagag
gagacgacactggatgagaagctcttcctgctggcatgcgagaaaggtgactactacatg
gtgaagaagctgctcgaggagaaccgacatggcgagctcaacatcaactgcgtggacgtg
ctgggccgagacgccgtgaccatcgccatcgagaatgagaatctagacatcctgcagctt
ctgctggagcatggctgccaggcgacagatgctttgctagtggccatagactccgaagtg
gtcggagctgtggacatcctcctcaatcacaggccgaggagatcttccaagccctcaatt
gctaaactgatgcagcggattcagaacccggagtattccaccaccatggatgtggctccg
gtcatcctggcggctcacaggaacaactacgagatcctgacgatgctcctgaagcaggac
atctcgcttccccggcctcatgctgtaggctgcgagtgcacgctctgcaatgctaaaaac
aagaaggacagcttgcgacactccaggttccgccttgatatctaccgatgcttggctagc
ccctctctcatcatgctgactgaggaagatccaatactcagagcctttgagctgagcgca
gacctgaaggagctcagccttgttgaggtggagttcaggaacgactatgaggaactggcg
aagcagtgcaagatgttcgccaaggacctgctggctcaggctcgaaactctcgggaactc
gaagtgattctcaaccacacgtccagcgacgatcacgtggacaagagaggtttactggag
gagcgaatgaacctcagccgactcaaactcgccatcaagtacaaccaaaaagagttcgtg
gctcagtccaactgtcagcagttcctcaacaccgtctggttcggagagacggccagctac
cgccgcaaacacacctgtctgaagatggccacagtcctgagcgtggcgatgctttggccg
ctgctttccgtctgctaccttctggtgccgcgctcccgagtcggccagataatacacacg
cctttcgtgaagttcatcatccacagcgcctcctacttcaccttcctgctgctgctcaac
ctgtactctctggtctacaacgagggcaaacagaacacaatgggccccgcactggagatg
atcgattacctgctcatcctctggatcataggaatggtgtggtcggacgtaaagcgtctg
tggtacgtggggctggaagactttctggaagagtcgaggaaccagctgagttttgtgatg
aattccctttacctggccacttttgccctcaagattgttgcgcatagcaagtttaaaaat
gcccaggacacggacaggaagaactgggatgccttccatcccatcctggtggctgagggc
ttgtttgccttcgccaacgtcctgagttacctgcgacttttcttcatgtacaccaccagc
tctatactggggccactacagatctccatgggtcagatgctgcaggagtttgggaaattt
ctgggcctcttcctgctcgtgttgttctccttcacgattggactcacgcagctctatgga
aaggaccagaaagacccagacaagaatcaaaccaaggactgcgagggcatcttctgccag
caacagagcaatgatgcattccacacgtttatggggacctgctacgccctgttctggtac
atcttctccctggcacatgttgcactcttcgtcacccgcatcagctacacggaggagctg
cgatcttttgtgggcgccatgatcatcggcacctacaacatcgtggtggttatcgtgctg
accaagctgctggttgcaatgctccataaaagcttcagacaaattgccaatcacgaggat
aaggagtggaagtttgctcgggccaaactgtggcttagctacttcgatgacaagtgtacc
ctgcctcctccgttcaacatcctgccctccccgaagaccgtctgctacttgttgaccagc
atgagcaagtggatctgctcacacacctcaaagggcaaagtgaagagacagaatagcctt
aaggagtggaagaacctgaagcagaagcgagacgagaactaccagaagatcatgtgctgt
ctggttcaccgctatctgacctccacgcggcagaagatgcagagcacagaccaggcaacg
gtggaaaacctgaacgatctgcgccaagatctgtccaagtttcgcaacgagatgagggac
ctgttaggtttccggacgtccaaatacgccatgttctacccaaggagctaa
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