Amphiprion ocellaris (clown anemonefish): 111581496
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Entry
111581496 CDS
T06018
Symbol
rarga
Name
(RefSeq) retinoic acid receptor gamma-A isoform X1
KO
K08529
retinoic acid receptor gamma
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aoce03000
]
111581496 (rarga)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
aoce03310
]
111581496 (rarga)
Transcription factors [BR:
aoce03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
111581496 (rarga)
Nuclear receptors [BR:
aoce03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
111581496 (rarga)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
PRIMA1
CR_prot_dom_plant
Motif
Other DBs
NCBI-GeneID:
111581496
NCBI-ProteinID:
XP_023145445
Ensembl:
ENSAOCG00000024160
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Position
8:complement(30516561..30559765)
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AA seq
510 aa
AA seq
DB search
MATNREQQVGHMTGFPPAVYPFPFNSMRSHSPFDLLANSSLFGRFGADLPKEMAALSVET
QSTSSEEMVPSSPSPPPPPRVYKPCFVCQDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYT
CHRDKNCQINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKDVKEEVVLPESYELSG
ELEELVNKVSKAHQETFPSLCQLGKYTTNSSSDHRVQLDLGLWDKFSELSTKCIIKIVEF
AKRLPGFTTLTIADQITLLKSACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGF
GPLTDLVFAFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPQKVDKLQEPLLEALKIY
ARRRRPNKPHMFPRMLMKITDLRGISTKGAERAITLKMEIPGPMPPLIREMLENPEAFDD
QTESNDSPPPPPPPPPPPPPALVLKQEAEDEDDSWATENGSEPSPEEEDEDDDDDVGDEE
RDRGSDSDGEPWGVLDNIDGSRKGLVGRAQ
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggctaccaacagggaacagcaggtgggtcacatgaccggcttcccacctgctgtctac
cccttcccattcaactccatgagaagccactccccctttgacctgttggccaacagcagc
ctgtttgggagatttggggccgacctgcctaaggagatggccgctctctcggtggagacc
caaagcaccagctcagaggagatggtacccagttctccatctccacctcccccacctcgt
gtctacaagccctgctttgtgtgccaggacaagtcctcagggtaccactacggggtcagc
tcctgtgagggctgcaagggtttcttccgtcgcagtatccagaagaacatggtgtacacc
tgccaccgagacaagaactgtcagattaacaaggtcacacgcaaccgctgccagtactgc
aggctgcagaagtgcttcgaggtcggcatgtccaaggaagcggtacgcaatgacagaaac
aagaagaagaaggacgtgaaggaggaggtggtgcttcctgagagctatgagctaagtgga
gagctcgaagagttggtcaataaagtcagcaaagctcaccaagaaaccttcccttcactt
tgccagctgggcaaatacaccaccaactccagctcagaccaccgtgtccagctggatctg
gggctctgggacaagttcagcgagctctccaccaaatgcatcatcaagattgtggaattt
gccaagcggctgccaggtttcaccaccctcactatcgctgatcaaatcactctactgaag
tcagcctgcctggacatactgatgctgagaatctgcacacgctacactccagaacaggac
actatgaccttctcagatggcctgactctgaaccggactcagatgcacaatgcgggcttc
ggaccgctcacagatctggtgtttgcctttgccggccagcttctacccctggagatggat
gacacagaaaccggtctcctcagcgccatctgcctcatctgtggagaccgcatggatcta
gaagagcctcagaaagtggataagctgcaggagcctctacttgaggctctgaagatctac
gcccgtcgccgccgccccaacaaaccccacatgttcccgcgcatgctgatgaagatcacc
gacctcaggggcatcagtacgaagggcgcagagagagccatcactctgaagatggagatc
ccagggccaatgcctcctttgatcagggagatgcttgagaacccagaggccttcgacgac
caaacagagtccaacgatagtccgccgcctccaccgccgcctcctcctccgccaccaccg
gccctggtcctgaagcaggaggctgaggacgaggacgacagctgggccacggagaacggc
agcgagccgtcgccggaagaggaggacgaagacgacgacgacgatgtgggagacgaggag
agagacaggggctcggacagtgacggggagccctggggggttttggataacatagatggg
tcgaggaaaggcctcgttgggagggcgcagtga
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