Amphiprion ocellaris (clown anemonefish): 111581669
Help
Entry
111581669 CDS
T06018
Symbol
shoc2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_1
LRR_LRWD1
LRR_9
LRR_13
LRR_5
Motif
Other DBs
NCBI-GeneID:
111581669
NCBI-ProteinID:
XP_023145705
Ensembl:
ENSAOCG00000018473
LinkDB
All DBs
Position
4:8620775..8642511
Genome browser
AA seq
581 aa
AA seq
DB search
MSSTLGKEKDSKEKDPKGGPVGKEREKEAKALASLKDGGKETKTKGKDAKDGKKDTSSST
PGVAFSVDNTIKRPNPAPGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHMLPTSIKE
LTQLAELYLYSNKLQSLPAEVGCLSGLVTLALSENSLTSLPDSLDSLKKLRMLDLRHNKL
REIPAVVYRLTSLTTLYLRFNRITTVEKDIRNLSKLTMLSIRENKIKQLPAEIGELCNLI
TLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPETIGNLASINRLGLRYNRLSAIPR
SLAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSLN
MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV
CGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLECLPNEIAYLKDLQKLVLTNN
QLTTLPRGIGHLTNLTHLGLGENLLQHLPEEIGTLENLEELYLNDNPNLHSLPFELALCS
KLSIMSIENCPLTHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtactttaggcaaagaaaaagattcgaaagaaaaggaccccaaaggtggtcca
gtgggtaaagaaagagaaaaggaggccaaggctttggccagcttaaaggatggaggcaaa
gaaacaaagaccaaagggaaagatgccaaagatggaaagaaggacaccagcagctcaaca
ccgggtgttgccttctctgttgacaatacgataaagcggccaaacccagcaccaggtaca
cgcaagaagtccagtaatgccgaggtgatcaaagagcttaacaagtgtcgggaggaaaac
tccatgagactggatctatctaaacggtccattcacatgctgcccacctctattaaggag
ttgacgcagctggctgaactctacttatacagcaacaagctgcagagcctgccggctgag
gtgggttgcctatcaggcctggtcactttggccctcagcgagaactccctgaccagtttg
cctgactcccttgactccctgaagaagcttcgaatgcttgacctccggcacaacaagctg
agagagataccagctgttgtctatcgcctgacatctctgaccacgctgtacctgcgcttc
aatcgcatcacaacagtggagaaggacatccgaaacctatccaagctaaccatgctcagc
atccgagagaacaagattaaacagctacccgcagagataggggagctgtgcaacctcatt
actctggatgttgcccataatcagttggaacacctaccgaaggagattggaaattgcaca
cagataaccaacctcgacttgcagcacaatgagctcttggacctcccagagactataggt
aatctggcaagcataaatcgcttaggtctgagatataatagattgtcagccatccccaga
tccttagccaaatgtcgagaactggaagagctaaacctcgaaaacaacaacatttcagtg
ttgccagagggcctgctgtcaagtttggtaaaccttacaagtttaacactggcaaggaac
tgcttccagtcgtaccctgtgggtgggccatcccagttctccaccatttactccctcaac
atggagcacaaccgtatcaacaagatcccctttggtatcttttccagggccaaagtgtta
agcaagcttaacatgaaggacaaccagttaacatccctgccactggattttggcacatgg
actagcatggttgaacttaacctggccaccaatcagctgactaagatcccagaggatgtg
tgtggtctcgtctctctggaggtgttaatattgtccaataatcttctcaagaagttaccg
catggtattgggaatttgagaaagttacgagagcttgacttggaggaaaacaagttggaa
tgtctacctaatgaaatcgcttatcttaaagatttacagaaattggtgttgacaaataat
cagctgactacgctacccagaggtatcggccacctcaccaatctgactcatcttggtttg
ggggagaacctgctgcaacaccttcctgaggagattggcacactggagaacttagaggaa
ctgtacctcaacgacaaccccaacctgcacagcctcccgttcgagctggctctctgcagc
aagctgtccatcatgagcatcgagaactgtcccctcacccacctgccaccacagattgtc
gcaggaggcccctccttcatcatccagttcctcaagatgcaggggccataccgtgccatg
gtctga
DBGET
integrated database retrieval system
