Amphiprion ocellaris (clown anemonefish): 111581871
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Entry
111581871 CDS
T06018
Symbol
pwp1
Name
(RefSeq) periodic tryptophan protein 1 homolog isoform X1
KO
K14791
periodic tryptophan protein 1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aoce03009
]
111581871 (pwp1)
Ribosome biogenesis [BR:
aoce03009
]
Eukaryotic type
90S particles
Other 90S particles
111581871 (pwp1)
Pre-60S particles
Other pre-60S particles
111581871 (pwp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_EML_2
WD40_RFWD3
WD_LRWD1
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_DCAF12
VPS8_N
Beta-prop_SPT8
Beta-prop_RIG_1st
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
111581871
NCBI-ProteinID:
XP_023146015
Ensembl:
ENSAOCG00000011602
LinkDB
All DBs
Position
21:complement(6221871..6230643)
Genome browser
AA seq
491 aa
AA seq
DB search
MSSQITCVGWVKRGVAKETPDKVELSQEELQRIITEAKEELGELAAEEEEEEDEGLPPEP
SGSNIADEAEAPKDEEGNEEDDELAEYGLDKYDEEDTVTANLGDSLAGLTVFSTNEEDPY
ITIKDTDQYEREDFQIKPGDNLILAGKAEKDCCNLEIYVYNSEEDSLYVHHDILLPAYPL
CVEWLNFDPNPGEGPANYAAVGNMTPQIDVWDLDVVDCLEPVFSLGSKKAAKKKKKSKKQ
GAAAEPVEGHTDAVLDLSWNKLVRNVLASGSADETVILWDVSQGKPATTLRKHTDKVQTL
KFHPFEAQTLISGSYDKTAVLYDCRSPDSSYRTWRFSGQVERLVWNHFSPCNFLASTEDG
FVYCLDARSDKPVFTLRAHDEEVSGLDLSSQIKGCLVTSSADKHVKIWDILGNKPNLVHS
RDMKMGVLFCASCCPDLPFVYAFGGQKDGLRLWNISDIAAVTEVFGSRERLVANTGSQAS
SCAATADMEVS
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagctctcagatcacttgtgtcggttgggtgaaacgaggcgttgccaaggaaaccccg
gacaaagtggagttgagccaagaggagctgcagcgcatcatcactgaggctaaagaagag
ttgggggagctggcagctgaggaggaagaggaggaggacgaaggtttgcctcccgaaccg
agtggcagtaacatcgctgatgaagctgaagctccaaaggatgaagaaggaaacgaggaa
gacgatgaactggcagagtacggcctggataaatacgacgaagaggacacagtgacggct
aatcttggcgacagtctggctggactcacggtgttcagcaccaacgaggaggatccgtac
atcaccatcaaagatacagaccagtatgagcgagaagatttccagatcaaaccaggtgac
aacctgatcctggcagggaaagcagagaaggactgctgtaatttagagatctatgtttat
aactctgaggaggattctctgtacgtccatcatgacattctgctgccggcgtatccactg
tgtgtggagtggctgaacttcgacccaaaccccggtgaaggaccagccaactacgccgcc
gtggggaacatgactcctcagatcgacgtctgggatctggacgtggtcgactgtttggag
ccagttttctctctggggagcaaaaaagctgccaagaagaagaagaagagcaaaaagcag
ggggcagcagctgaacctgtagagggccacacagatgcggtgctggatttatcctggaac
aaactggtcaggaatgtgttggccagtggatctgcagatgagaccgtgatcttgtgggac
gtgtctcaaggaaaaccagccacaactctgcgtaaacacactgacaaggtccagacgtta
aaattccacccgtttgaagctcagactttaatatcaggatcatatgacaagacggccgtt
ctttacgactgccggagtccagacagcagctaccggacctggaggttcagtggacaagtg
gagcgtctggtctggaaccacttttcaccctgtaacttcctcgccagcacggaggacggc
tttgtctactgtctggacgctcgctcagataaacccgtgttcaccctgagggctcacgac
gaggaagtgtcaggtttggacctcagcagccagattaaaggatgtttggtcacctcatca
gccgacaaacacgtcaagatctgggacattttaggcaacaagcccaacctggtgcactcc
agagacatgaagatgggagttctgttctgtgcctcctgttgccccgacctgcccttcgtt
tacgcctttggggggcagaaggacggtttacggctttggaatataagtgacattgcagca
gtgactgaggtgttcggcagtcgagaacgtttggtggcaaataccggctctcaggcttcg
agttgtgcagccacagcagacatggaggtctcctag
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