Amphiprion ocellaris (clown anemonefish): 111581957
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Entry
111581957 CDS
T06018
Symbol
tmc6b
Name
(RefSeq) transmembrane channel-like protein 6b
KO
K21988
transmembrane channel-like protein
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
111581957 (tmc6b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aoce02000
]
111581957 (tmc6b)
03037 Cilium and associated proteins [BR:
aoce03037
]
111581957 (tmc6b)
Transporters [BR:
aoce02000
]
Other transporters
Pores ion channels [TC:
1
]
111581957 (tmc6b)
Cilium and associated proteins [BR:
aoce03037
]
Other cilia and associated proteins
Stereociliary proteins
111581957 (tmc6b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
YtrI_N
Motif
Other DBs
NCBI-GeneID:
111581957
NCBI-ProteinID:
XP_023146151
Ensembl:
ENSAOCG00000007917
LinkDB
All DBs
Position
4:6228309..6247701
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AA seq
839 aa
AA seq
DB search
MARNVNFDLNHPLMEAGLESPVDEEGVHDSFNQLIAEQSQNGGISDAYELQQLQRELDEE
GRDDVAYLSSPVREFRGRNKGRRDVEWEEDERQTDPLIAERWSSATLRILSSMPSRTIGR
SRGAIISQYYNRTMQLRRRRQSRPSIKDFSRSARPSIRGYGMEADEADGEDTEVSKRERL
VNNLQNLSVTDRIRMLRAMPLSVAEKNELRRLALQKEKQTLSGSKLPCCSRLKYYIIIAV
RQSWYSWLSFLHSLQLWQMPLKRVSGRFGTGVLSYFIFLKTLLYFNLFLFLVTGAFLVLP
QAVHPPMLPAERRPFSGLELLTGAGCFSDSVMYYGYYSNDTLHKSCKDDGAVQNDSVSNS
TGHDCVSKRLSYKMSLAYFFTIGMAFFITCIILVYSMSKSFGQSFRIDKSHSILAMKAFC
SWDFKVIKKTSVKLMSENICTQLKELLAEVNHKRVKNTVGQKLCRLMVHGLAWTICIVST
AACVTGIYFFSDYMHQNLQQSSRSVNQDPLLNEASLLALPVLVSLINLLLPGLFNLAAWM
EDYESPSVRTYVAISRNLMLKVSVLGVLCYHWLGRVAADPNSIGLKCWESFVGQELYRFL
LMDFIFTLLDTLFGEFLWGLFSEKVLRRRRKPAFDIARNVLELIYGQTLAWLGVLFTPLL
PAVQILKLLLLFYIKMSSVMMNCQAPRKPYRVSQMTTIFITLLCFPSFLGASVCVTYTMW
SIKPSVSCGPFRGLQTMFQAGKLWVQEMEKHDPKLSVVARAHSYLVEHPLFLFVGAGIFL
IVIYFYSQVVDGQRKIISLLQEQIENEGEDKKFLITKLQSIHEQKRTPARRLTSQDSTC
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggcccgaaatgtaaactttgacttgaaccatcctcttatggaagctggactagagagt
ccagtggatgaggaaggtgttcatgactctttcaaccagctgatagcagaacagagtcag
aatggaggaatatctgatgcctatgagctgcagcagctgcagagagaactggacgaggag
ggccgagatgatgtggcctacctgtccagccctgtacgtgagtttaggggccggaataaa
gggcgacgggatgtggagtgggaggaagatgaaagacaaacagaccccctaatagctgaa
cgctggtcttcggccaccttgaggatcctgtcctccatgcccagtcgcactatcggccgc
agcaggggagccatcatctctcagtactacaacaggactatgcagcttcgcaggcgcagg
cagagcagaccatccatcaaagacttttcccgctctgccagaccgagcatacgaggctat
ggcatggaggcagatgaggcagatggagaagacacagaggtgagtaaaagggaacgtttg
gtgaacaacctgcagaacctgtcagtgaccgacagaatcaggatgctccgtgcaatgcct
ctcagtgtggctgagaagaatgaactcagaaggttagcattacaaaaggaaaaacaaaca
ctttctggcagcaagcttccctgttgcagtcgactcaaatattacatcatcattgctgtg
agacagagttggtacagctggttgtccttcctgcactccctccagctgtggcaaatgcca
ctcaagagagtgagcggccgttttggcactggagttctctcatacttcattttcctcaag
acccttctctacttcaatctctttctgttcctggtcacgggtgccttcttggtgctgcct
caggccgttcaccctccaatgctgcccgcagagagacgtcctttctctggactagagctc
ctcactggagcgggctgtttctcagactcagtgatgtactatggatactactctaatgac
acactgcataagagctgcaaggatgatggtgcagtgcagaatgactctgtgtccaattca
accggacacgactgtgtgtcaaagcgcctctcttataaaatgtcactggcatacttcttt
accattggaatggccttctttatcacgtgtatcatccttgtgtacagtatgtcaaagtcg
ttcggtcagagcttcagaattgacaaatcccatagcatcttggccatgaaagccttctgc
tcctgggacttcaaggtcatcaaaaaaacttccgttaaacttatgtcagaaaatatctgc
acacagctcaaggaactgctggcagaggtgaatcataaacgtgtcaagaacacagtgggc
cagaagttgtgccgactgatggttcacggcctggcatggacaatctgcatagtaagcacc
gctgcctgtgtgactggcatttacttcttctcggactacatgcaccagaacctgcagcaa
agttctcgtagtgtcaaccaggaccccttgttgaatgaggccagcctgctggctctacct
gtgctggtgtccctcatcaacctgctgctgcctggcctcttcaaccttgcggcctggatg
gaggactatgagtcaccttctgtacgcacatatgtggccatcagccgaaacttgatgttg
aaagtgagcgtgcttggagtcctgtgctaccactggctgggtcgggtggctgctgaccct
aacagtattgggctcaagtgctgggagagttttgttggtcaggagctttatcgcttcctg
ctcatggacttcatcttcaccctactggacaccttgtttggagagtttctttgggggttg
ttttctgagaaggtgctgaggagaaggaggaaaccagcgtttgatattgccaggaatgtc
ctagagctcatctatggacaaacattagcctggttgggcgttctcttcactcctcttctc
cctgcagtgcagattctcaaactgctgctcctcttctacattaaaatgagcagtgtgatg
atgaactgtcaggcccccaggaagccgtacagagtcagccagatgaccaccatcttcatc
accctcctctgcttcccctccttccttggcgcctcagtgtgtgtcacttacacaatgtgg
agtatcaagccatctgtatcatgtggtccgttccgtgggctccaaacgatgttccaggca
ggaaaactatgggtgcaagaaatggaaaaacatgatcccaagctgtccgtagtggccaga
gctcactcctacctggtggaacaccctcttttcctgtttgtgggagcaggaatatttctg
atagtcatctacttctacagtcaggtcgtggatggtcaaagaaagatcatcagtttactg
caggagcagatagaaaatgagggagaggataaaaagttcctgatcactaagctccagtcc
atccatgagcagaaacgaacgcctgctcgaagactcacaagtcaggattctacgtgttaa
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