Amphiprion ocellaris (clown anemonefish): 111582143
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Entry
111582143 CDS
T06018
Symbol
ddb2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03420
Nucleotide excision repair
aoce04115
p53 signaling pathway
aoce04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111582143 (ddb2)
09124 Replication and repair
03420 Nucleotide excision repair
111582143 (ddb2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
111582143 (ddb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aoce04121
]
111582143 (ddb2)
03400 DNA repair and recombination proteins [BR:
aoce03400
]
111582143 (ddb2)
Ubiquitin system [BR:
aoce04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
111582143 (ddb2)
DNA repair and recombination proteins [BR:
aoce03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
111582143 (ddb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
WD40
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_EML_2
WDR55
Beta-prop_EIPR1
Beta-prop_TEP1_C
EIF3I
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
111582143
NCBI-ProteinID:
XP_023146440
Ensembl:
ENSAOCG00000001392
LinkDB
All DBs
Position
3:13302981..13309787
Genome browser
AA seq
491 aa
AA seq
DB search
MKSKPVKSDASDSKRKGKKRAAEDSATTLSKKLRDKKNGETSKSGAPVKSAGVQRRGVHG
SILHYIYKSTLGQSLHSQMRQCLQEPFVRSLSSYHFHGATSPFDRRITCLEWHPTHPSTL
AVASKGGDIYLWDFEVPTKKTFIQGSGAGDFIGGMKFCPTDLSRVYVASGEGTLTMQSFE
GRTPTLLSRTEDCGHDHHNVCYWYCCVDVSVSRQMLVTGDNVGQLVLVGLDGQKIFSDKL
HKAKVTHAEFNSRCDWLLVTASVDHTVKLWDLRNIKDKKSFLHEMPHEKAVNSAYFNPLD
CSKLLTTDQYDEIRVYSSPDWSKPQHIIQHPHRQFQHLTPIKATWHPVYDLIVAGRYPDD
RVCTGDQRTIDIYDSNTAELVCQLYDPTVAGIKSINKFNPMGDVIGSGMGVTVLVWDRNE
SLISDRHKLQESSASANSLRGQRRSQQRSNRDRKAPAVDAKLKKKLASLEETETKTKTKT
DKQKQAQMRKK
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcaaacctgtcaagtcagacgcatctgattcaaagaggaaaggaaagaaaaga
gccgccgaggactctgctacgactctgtccaaaaaactgagagacaagaaaaatggagaa
acgtcgaaatcaggagctcctgtcaagtctgcaggagtccagaggagaggtgttcatggc
agcatcctgcactacatttataagagcactctgggccaaagtctgcactcacagatgaga
cagtgtctccaggagcctttcgtccgctctctgtcgtcttaccatttccacggtgcgacg
agtcccttcgatcgcaggatcacctgtctggagtggcatcccactcacccctccactctg
gctgtggcctccaaggggggagacatttatctttgggactttgaggtgcccacaaagaag
accttcattcaagggagcggagcgggagactttatcggagggatgaagttttgccccacg
gacctctctagagtctatgtggcttctggtgagggtacactgaccatgcagagctttgag
ggccgaacacccaccctattgtccagaactgaggactgtggccatgatcaccacaacgtt
tgctactggtactgctgtgtggatgtgtctgtaagccgacagatgcttgtgaccggagac
aatgtgggtcagctcgtacttgtgggtttggacggtcaaaagatttttagtgataaactg
cacaaagccaaagtgactcatgcagagtttaactcccgatgcgactggctgctggtgacg
gcgtcggtcgaccacacggtgaagctttgggacctgaggaacatcaaagacaagaagagc
ttcctccatgaaatgcctcatgagaaagctgtaaactcagcctatttcaacccactggac
tgctccaagttgctcaccacggatcagtatgacgaaatccgtgtctactcatctcccgac
tggtcgaagcctcaacatatcatccaacacccacacagacagtttcagcacctcacaccc
atcaaggccacatggcatcctgtatatgacctgattgtggccggacgttaccccgatgac
cgggtttgcaccggcgatcagaggaccatcgacatctatgactccaacacggcagagctg
gtgtgtcagctgtacgatcccactgttgcagggatcaaatctatcaacaaattcaatccg
atgggtgatgtgatcggatctggcatgggtgtaacggtgctagtctgggaccggaatgaa
tcactgatcagtgatcggcacaaattgcaggaaagttcagcctcagcgaacagtttgaga
ggacagaggaggagtcagcagcgctccaacagggaccggaaggctcctgctgtggatgca
aagctcaagaaaaaactagcatctctggaagaaactgagaccaaaaccaagaccaagact
gacaaacaaaaacaagctcagatgaggaagaagtga
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