Amphiprion ocellaris (clown anemonefish): 111582174
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Entry
111582174 CDS
T06018
Symbol
itga6a
Name
(RefSeq) integrin alpha-6 isoform X1
KO
K06485
integrin alpha 6
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04382
Cornified envelope formation
aoce04510
Focal adhesion
aoce04512
ECM-receptor interaction
aoce04514
Cell adhesion molecule (CAM) interaction
aoce04518
Integrin signaling
aoce04810
Regulation of actin cytoskeleton
aoce04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111582174 (itga6a)
04514 Cell adhesion molecule (CAM) interaction
111582174 (itga6a)
04518 Integrin signaling
111582174 (itga6a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111582174 (itga6a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
111582174 (itga6a)
04810 Regulation of actin cytoskeleton
111582174 (itga6a)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
111582174 (itga6a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aoce04147
]
111582174 (itga6a)
04515 Cell adhesion molecules [BR:
aoce04515
]
111582174 (itga6a)
04090 CD molecules [BR:
aoce04090
]
111582174 (itga6a)
Exosome [BR:
aoce04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111582174 (itga6a)
Exosomal proteins of breast milk
111582174 (itga6a)
Cell adhesion molecules [BR:
aoce04515
]
Integrins
Integrin alpha subunits
111582174 (itga6a)
CD molecules [BR:
aoce04090
]
Proteins
111582174 (itga6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
111582174
NCBI-ProteinID:
XP_023146505
Ensembl:
ENSAOCG00000018455
LinkDB
All DBs
Position
11:9261854..9284209
Genome browser
AA seq
1101 aa
AA seq
DB search
MWTCAAMLLQGGLSAAVHAALLFSFFSPEPAVVLAFNLDTGHVIRKHGEPGSLFGFSLAL
HRQINPDKMMMLIGAPRARALGKQTANITGGLYKCEITMSSGCERIEFDNEEDTHSENKE
NQWMGVTVQSQGPGGKIVTCAHRYQRRLFVNTPQESHDITGRCYVLSQDLTIDSSSDEDG
GNWNFCQGRARGHEMFGSCQQGLAATFTKDYHYVVFGAPGAYNWKGIVRVEQKNTTLLEM
EVYDDGPYEVGNEQSSNPELVPVPANSYLGFSLDSGHRITKSRGLTVVAGAPRANHSGAV
VLLKKESQTSTRLLVEHTLHGPGLASSFGYDVAVVDLNGDGWEDIVVGAPQFYMKDRDVG
GAVYVYINKAGRWERITPVRLNGTKHSMFGLAVENAGDINQDSYEDIAVGAPHDDAGTGK
VYIYHGSAQGIKTSPAQILSGKEHNIRFFGYSLAGNMDLDGNSYPDLAVGSLSDTAFIYR
ARPVITIRRSVKISPQEIDLTIKTCGNSICFTVEACFAYKANPASYSPKLTIGYFVEADG
VRRKQGLPSRVVFLNKSRSEFDYQFNGTIDLRGQGQESCIMIKARLKDNIKDKMRSIPVE
VSPEIIGAKRQKIKNGLPQLMPILDSSRPSKVITEVNFIKEGCGIDHICRSNLKMEYSLY
YKQNNMDVYLPLNNSKNSIPEFLLSYENKNLALRVTVNNMNGDDAYEAKVVASFPDTLSY
SGVRSHQTTTEKPIICTANQNGSQADCDLGNPFKRDSQATFFIILSTVDMSLDTTEFEID
LQLQTTSVQENIAPVKVKAKVIIELPLSVTGEASPSQVSFGGVVKGESAMGTEEEIGSLI
NYTFRINNLWKSVKPSAKAFLHIQWPRYNKDGKWLLYLVKITAKGPENIVCSPHSEIDSL
QLTQKTSPSRTKREIVRKQRKTGGKVSHLSGKKKVLSCEKEKNCVVLRCPLQGLDGTSVE
LRSRLWNSTFIEDYASFSTLDLVVKASLVLDIKAKNVILRTPDTTVTVTVSPDSPVAQYL
GVPWWIILVAVLAGVLILALLVFLLWKCGFFKRSKQDDSVPRYHAVRIRKETPECKDGKV
KLDAFDKKQWMTTWINNESYS
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgtggacctgcgctgcgatgctgctgcagggaggactctctgctgctgttcacgctgca
cttttatttagttttttttccccggagccagctgtggtgctcgccttcaacctggacacc
ggtcatgtcatcaggaaacacggagagccggggagtctgttcggattctctcttgccctg
caccgacagatcaacccggataaaatgatgatgttgatcggtgcccccagagccagagct
ttgggaaaacaaacagccaacatcacaggaggcctttataaatgtgagatcacaatgtcc
agtggctgtgaacgcatcgaatttgacaatgaagaggacacacatagtgagaataaagag
aatcagtggatgggggtgactgtgcagagccagggacctggaggaaagattgtgacatgt
gctcaccgctatcagaggcgcttgtttgtgaacacccctcaggagtctcatgacatcacg
gggcgctgctacgtcctgagtcaggacctgaccattgactcgtcttcagatgaggatgga
gggaactggaacttctgtcaaggcagagcgagaggccatgagatgtttggatcatgccag
cagggtctggctgccactttcaccaaagactaccattacgtggtgtttggagcacctgga
gcgtacaactggaaaggaattgttcgagtggagcaaaagaacaccactttgctggagatg
gaagtgtatgatgacggtccgtatgaagtcgggaatgagcaatcctcaaaccctgagctg
gtgccagtacctgccaacagctacctcggattctccctcgattcgggacatcgcatcacc
aagagtcgtggcctgacggtggtggctggagcaccaagagccaatcacagtggagctgtg
gtcctgctgaagaaggagagtcaaacatccaccagactcttggtggagcacacgctccat
gggccgggactggcatcttcctttggctacgacgtggctgtagttgatttgaatggtgac
ggatgggaagacatagttgtcggagcccctcagttctacatgaaggacagggacgtcgga
ggagctgtttatgtctacatcaacaaggcagggaggtgggaaagaatcactcctgtccgt
ctgaacgggaccaaacactcgatgtttggactggctgtggagaacgctggagacatcaat
caagactcatatgaagatattgctgttggagctccacatgatgatgctggcacaggaaaa
gtctacatttatcatggctctgcacagggaatcaaaaccagtccagcacagatcctttca
ggaaaagaacacaacattcgattctttggatattctctagcgggaaacatggacctggac
ggtaactcttatccagaccttgctgtaggctctctgtcagacacagctttcatttacagg
gcacggccagtcataaccatcaggagaagtgtcaaaatatctccacaggagattgacctt
acgataaaaacctgtggtaacagcatctgcttcactgtagaagcatgctttgcctacaaa
gcaaaccctgcatcttacagcccaaagctaactattggctattttgtggaggcggatgga
gttcgcaggaaacaagggctgccctccagagtggttttcctgaacaaatcccgctctgaa
ttcgactaccagttcaatggcaccatagacctacgaggccaaggccaagaatcatgcatc
atgataaaagccagacttaaggacaacattaaggacaagatgcgcagtattcctgttgag
gtatctccagaaattattggtgcaaaacgacagaagataaaaaacggcctccctcagctg
atgcccatcttagactcttctcggccaagcaaagtcatcactgaggtcaacttcataaaa
gaaggctgtggaatagatcatatttgtcgcagtaacctgaagatggagtacagtttatac
tacaagcaaaataacatggatgtttaccttccattaaacaacagcaagaacagcatcccc
gagtttcttctgagctatgagaataagaacttggctctgcgggtgacagtgaacaacatg
aatggcgacgatgcttatgaggcaaaggttgtggcaagtttcccggataccctgtcatat
tctggtgtccgctcacatcaaacaacaacggaaaagccgatcatctgtacggccaatcag
aacggctctcaggcagactgtgatctgggaaatccctttaagagagactcacaggctacc
tttttcattatcctgagcactgtggacatgagcctcgacaccactgagtttgagatcgac
ctgcagctccaaacgaccagtgtgcaagaaaatattgctcctgtgaaagtaaaggcgaaa
gtcatcattgaattgcctttgtcagtcactggggaggccagtcctagtcaggtttccttt
ggaggtgtcgtgaaaggagaaagtgcgatggggactgaagaagagattggaagtttaatt
aactatacattcagaataaacaacttgtggaagtctgtgaagccttctgccaaagccttt
ctacacattcagtggcccagatacaacaaagatgggaaatggcttctgtacctggtgaag
atcaccgctaaaggacctgagaacatcgtttgctctccccattctgagatcgactctctc
caactcacccagaagacttctccatcccggacaaaaagagaaattgtgagaaaacaaaga
aaaactggcggcaaagtgtcacatctgtcaggcaaaaagaaagttctgtcctgtgaaaaa
gagaagaactgtgtggtactgaggtgccccctgcagggactcgatggtacatcagttgaa
ctgagatctcgtctgtggaactccacctttattgaggattacgcctctttttccacattg
gatttagttgtgaaggcctcgcttgtgcttgatattaaagctaaaaacgtgatcctgaga
actcctgacaccactgtgacggtgactgtttctccagacagtccagtagctcagtatttg
ggagttccctggtggatcattctggtggcagtcctcgcaggagtcttgattttggctttg
ttagtgtttctgctctggaagtgtggattcttcaaacgctccaaacaagacgacagcgtc
cctcgttaccacgcagtgcggatcagaaaggaaacccccgagtgtaaagatggaaaagtc
aaactcgatgcttttgacaagaagcagtggatgacgacttggattaacaatgaaagttac
tcctga
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integrated database retrieval system
