Amphiprion ocellaris (clown anemonefish): 111582189
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Entry
111582189 CDS
T06018
Symbol
rorb
Name
(RefSeq) nuclear receptor ROR-beta isoform X2
KO
K08533
RAR-related orphan receptor beta
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aoce03000
]
111582189 (rorb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
aoce03310
]
111582189 (rorb)
Transcription factors [BR:
aoce03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
111582189 (rorb)
Nuclear receptors [BR:
aoce03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
111582189 (rorb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
DUF2716
Motif
Other DBs
NCBI-GeneID:
111582189
NCBI-ProteinID:
XP_023146528
Ensembl:
ENSAOCG00000017756
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Position
6:complement(18638916..18662890)
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AA seq
472 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQARLQEQRQQQTGEAEALAR
VYSSSLTNGLSTLNHEIGGTYANGHVIELPKGGHGNGGGVPGGYYGMDSTQPSPDQSGLD
MSGMKHIKQEPVYDLTPVPNLFSYGGYQDSQLGPNNVSMGELDRIAQNIIKSHLETCQYT
TDELQQLAWQTHSYEEVKMYQSKPRDVLWQQCAIQITHAIQYVVEFAKRISGFMELCQND
QILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGCDDLVSAVFDFAKSLC
SLQLTEEEIALFSAAVLISTDRPWLMEPRKVQKLQEKIYFALQHIMQKNHMDEDALAKLI
SRIPTLSALCTLHTEELQAFQQLHPETVNVLFPPLYKELFNPDPNSAMAMPK
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcccaaatcgaagttataccatgcaaaatctgcggagacaaatcatcaggtatc
cattacggagttattacgtgtgagggatgtaagggtttcttcagacggagtcagcaaaac
aatgcctcgtactcctgcccccgccagaggaactgcctcatcgacagaacaaaccgcaac
cgctgccaacactgccgcctgcagaaatgtcttgccctaggaatgtccagagatgcggta
aagtttggccgcatgtccaagaagcaacgtgacagcctgtatgcagaggtccagaaacac
caggcacgactgcaggagcagcggcaacagcagacgggtgaagcagaagctctggctcgt
gtttattcgtccagcctaaccaatggactgtccacccttaaccatgaaattggaggcacc
tatgccaacggtcacgtcattgagctacccaaaggtggccatggtaacggaggaggagtc
cccgggggctactatgggatggattccacccagccgtctccagaccagtcaggtttggac
atgtcgggcatgaagcacattaagcaggagccggtgtatgacctgacgccagtacccaac
ctgttcagctacggaggctaccaggacagtcaactggggcccaataatgtcagcatggga
gagctggatcgcattgctcagaatatcatcaagtcccacttggagacatgtcagtacaca
acagacgagctgcagcagctagcctggcagacacattcctacgaagaggtcaaaatgtac
cagagcaagccccgggacgtgctgtggcagcagtgtgccatccagatcacccatgcaatc
cagtacgtggtggagttcgccaagcgtatctcagggttcatggaactgtgccagaatgac
cagatcctcctcctcaagtcaggttgtttggaggtagtcttggtgcggatgtgcagagca
ttcaaccctctcaacaacactgtgctctttgaagggaagtacggaggcatgcagatgttc
aaagctctgggttgtgatgacttagtgagtgcagtgtttgactttgccaagagtttgtgt
tcgctgcagctgacagaggaggagatcgctctgttctcagcagctgtactaatttccaca
gatcgaccatggctgatggagcctcggaaggtccagaagctccaggagaagatctacttt
gctctgcagcacattatgcagaagaaccacatggacgaagatgcactggcaaagctgatc
agccgaatcccaacattgtcagccctgtgcacgctccacaccgaggagcttcaggccttc
cagcaactccacccagaaacagtcaacgtcctcttccctccgctctacaaagaactcttc
aacccggacccaaactctgccatggcgatgcccaagtga
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