Amphiprion ocellaris (clown anemonefish): 111582194
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Entry
111582194 CDS
T06018
Symbol
lsm1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111582194 (lsm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoce03019
]
111582194 (lsm1)
Messenger RNA biogenesis [BR:
aoce03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111582194 (lsm1)
mRNA degradation factors
5'-3' decay
Lsm complex
111582194 (lsm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
111582194
NCBI-ProteinID:
XP_023146535
Ensembl:
ENSAOCG00000030090
LinkDB
All DBs
Position
6:complement(18593820..18596724)
Genome browser
AA seq
133 aa
AA seq
DB search
MNYVPGTASLIDDIDKKHLVLLRDGRTLIGYLRSIDQFANLVFHQTVERIHVGKKFGDIP
RGIFIVRGENVVLLGEIDVEKPCDTVLQQVSIEEILEEQRLQQQTKQETEKVKMQVLKDR
GLSIPKADNLDEY
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaactacgtaccagggacggccagcctcattgacgacatcgacaagaagcacctggtg
ctgctccgagatggcaggacgctgatcggttacctcagaagcattgatcagtttgccaat
ttagtttttcaccagacagttgagcgcatccacgtggggaaaaagtttggtgacatcccc
agaggaatattcattgtgagaggagaaaatgtggtgctgctcggagagatagatgtggag
aagccctgcgacacggtgctgcagcaggtctccattgaagagattctggaggagcagcgg
ttgcagcagcaaaccaaacaggagacggagaaagtcaaaatgcaggtcctgaaggaccga
ggcctttccatacccaaagccgataatttggacgaatattaa
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integrated database retrieval system
