Amphiprion ocellaris (clown anemonefish): 111582199
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Entry
111582199 CDS
T06018
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein-like isoform X2
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoce03019
]
111582199
03036 Chromosome and associated proteins [BR:
aoce03036
]
111582199
Messenger RNA biogenesis [BR:
aoce03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111582199
Chromosome and associated proteins [BR:
aoce03036
]
Eukaryotic type
Gene silencing
piRNA pathway
111582199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
M_domain
Ago_hook
UBA_7
UBA
RRM_1
RRM_occluded
Mei5_like
UBA_NBR1_C
THOC7
Motif
Other DBs
NCBI-GeneID:
111582199
NCBI-ProteinID:
XP_023146547
Ensembl:
ENSAOCG00000017648
UniProt:
A0A3Q1CMB7
LinkDB
All DBs
Position
4:12488670..12545727
Genome browser
AA seq
1891 aa
AA seq
DB search
MEEKKKKKQEEKTKKDVAQKKAADQKPKVPEPAPIKPSPGTSHHLHPASPTLPLSSSSSS
SGNGKRASCSSQLLTQTPPQQQCQLSSASARYPPREVPPRFRQQEHKQLLKRGQPLPAGA
LSALTLSSSSSSSSSPSSSYSSSSTSTSSTTPNSATSTVGNHHSDISLQSGPGAQYETSH
WGASVPVNSPSSANSWDKVIIDGSDTEAWPSISRSSDPSHPATPECPLGSASSNLDTSAV
TTTSRSSFLSMATGAAGQQAHYPSLKANNNMMTGPGSTNTLAGSRGWGSDGKQDGMNGGR
GAPNNWGSPNFNLNLNPNANPSAWPLLGHEGGGGGSIGPNGVSNSSSLPPGVNGNGNMGN
GSLGNADNGGGGWVGMIAANENDQQHPSTNTNMSFNMEPANRNTDGPNHTKQQQQAQEPM
SPIHGLTGWGGQSPTESSQLNGDTTGSSVWGSGETKAAESPKDSGWDSTPSGGLSAWGRQ
GSGGGSSGSGGWGDWGKSSGGGDASKGWDSVDAGSSGSGQEPQLSSWGQQPGTAPASEDS
GDSSEGRSNRRDRPSSVEFAPLLPRQDLDPRVLSNSGWGQTPIRQHTVWEMEEASSNDGK
SNSSSDTLGAPSSNSGPSSSNGGTINPNIAPSQRPGSGGKSDSEGSSSGWGAPPPQPIQT
GSGWGDPSQSLSKAPNGTTSGWGDPLPTNGPKSGGTPSWGSEDKSPSWDQGMMKSQPTSW
GEGPKSSHGWGNNNGGTNGTTSTGDWGEPDVKNNGSSSSMWESEGGNGGSGGWKESPRGG
SRGGNWGKPAPAVSNSNWGESPRANGSLQGGWGSSKPQESSSSSSTGSGGGGSIGSWGGP
GSVKQSNSGWGNVSKQDQSMEPTGWEEPSPPSIRRKMEIDDGTSTWGDPNAYSKAVNMWD
RNNPNGNPGNGGPPPNKNGGMIMPNNNNNNHSVVPGNNNHHHSHHMHHHPHHGQPPTMQH
HGNNNGSPNNTTSHPVAGPQGRPPLANPGWGELPSVQPKSEPAWGEPAAPTSAVDNGTSA
WGKPPGGVGGWGDGGHEPSGPYGRANGPPGSAPCKPGPKPMQDGWGSAGEEMGMSTGQWD
TEDGDVWNSPTSQESSSSCNSWGNGPKKCPSKGKMGTKPDEAWIMNRLIKQLTDMGFPRD
PAEDALKSNNMNLDQAMTALLEKKTDLDKRVMGISDYSNGMNKPLVCRPSALSKDPSDRT
TFLDKDGVLSDDAPPSPFLPSPSLKLPLANSSLPGQGLGQGNPGLAMQNLNNRQIPSGMF
GSSGAAQTRAMQQQPPQPPVPPLSSSQPSLRAQVPQFLSPQVQAQLLQFAAKNIGLNPAL
LTSPINPQQMTLLYQLQQLQMAYQRLQIQQQMMQAQRNVSGPIRQQEQQVARTITNMQQQ
IQQHQRQLYQALLMKQQQLPSHSSSSSSSSAGLHPPGGPAGGPGSGKSTLDPFTGPHQAP
GLSDTLHTKEPPSSPNAYSTYPLSGLNPNMNVNCMEVGGLSLKEPPQPQSRLSQWTHSNS
MDNLAGNSSNLENNLNKHGAISAASSLVPPGKPPQMEDSYSPYNLISSSESPTSPLVPPD
SWGQGKSPNEKISNGTNINWPPEFCPGVPWKGLQNIDPENDPNMTPGSVPSGPTINTNIH
DVNRYLLRDRNGGKLSDLKSTWSPGPISQSQASLSHELWKVPQGPRNTTAPSRPPPGLTN
NKPSSTWGGNSLGLAQGWSGSYSSEGTTWSTDSSNRTSSWLVLRNLTPQIDGSTLRTLCM
QHGPLITFHLNLTQGNAVVRYSSKDEAAKAQKSLHMCVLGNTTILAEFAGEEEVNRFFAQ
GQSLGANTTSWQANPGTNQNRMGGTAQSHSIGQWSSGAGGGKTSGGDLLWGGVPQYSSLW
GPPSGEDARVIGSPTPINTLLPGDLLSGESM
NT seq
5676 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaagaaaaagaaaaaacaagaagaaaagaccaagaaggacgtcgcgcagaaa
aaggctgctgatcagaaacccaaagtgccagagcctgctcccattaagcccagtcccggc
acatcccaccacctccaccccgccagccccacgctgcccctctcctcctcctcgtcctct
tctggcaatggcaagcgcgcttcctgcagtagccagctcctgactcagactccccctcag
cagcagtgccagttgtcctctgccagtgctcgctacccgcccagagaggtgcccccacgc
ttccgtcagcaggagcacaaacagctactgaagagaggccagccactgcctgcaggagcc
ctcagcgctctcactctctcctcctcctcttcctcctcctcttcaccctcatcatcttac
tcttcctcttctacaagtaccagcagcactaccccaaactctgccacgtctactgtgggc
aaccaccactcagacatatctcttcagagtggccctggtgcccagtatgagacctctcat
tggggagcctctgtaccagttaacagcccatccagtgccaacagctgggacaaagtgatt
attgacggaagtgacacagaagcttggccctccatcagccgcagtagtgaccccagccac
cctgcaacaccagaatgccccttgggctcagctagctctaacttagacaccagtgctgtc
actactaccagtaggagtagttttctgagtatggccacaggtgccgcaggccagcaggcc
cactatccttccctcaaagctaacaataacatgatgacaggacctggatcaaccaacaca
ttggctggtagtagaggctggggctcagatggaaaacaagatggtatgaatggtggccga
ggagcacccaataactggggctctcccaattttaacttgaacctcaaccctaatgctaac
ccttctgcctggcctcttctaggccatgagggtggtggaggcggcagcattggccccaat
ggggtgtccaattcttcatccctcccaccgggtgtaaatggcaatggaaacatggggaat
gggagtctgggaaatgctgataatggtgggggaggttgggttggcatgatagctgctaac
gaaaatgatcagcagcacccttcaaccaacacaaacatgtccttcaatatggagcctgct
aaccgtaacactgacggaccaaaccacactaaacaacagcaacaagctcaggagcctatg
agccctatccatggcttaactggctggggaggccagtcacccactgaatcatcccagctc
aatggggacacaacaggcagctctgtatggggtagtggagaaaccaaggcagctgaatcc
cctaaggactcaggctgggactcaactccctctggaggtctttctgcctggggccgccaa
ggcagtggtggagggagtagtggaagtggtggctggggtgactggggaaaatcctctggt
ggtggagatgcatctaaaggctgggactcagtagatgctggcagttctggctccggccag
gagccgcaacttagctcatgggggcagcagcctggaacagccccagcaagtgaggatagt
ggggacagtagtgaaggtcgatcaaatcgcagagacagaccctccagcgtggaatttgcc
cccttgctaccccgacaggacttggacccccgagtgctgagtaactcaggttggggacag
acccccatccgacagcacactgtatgggagatggaagaagccagctctaatgatgggaag
agcaacagcagctcagacactttaggggcccccagctctaatagtggaccctcatcaagc
aatggaggtaccattaaccctaacatagcccccagtcagaggcctggctctggaggaaaa
agtgacagtgaaggatcatcctctggctggggagcccctccacctcagccaattcagact
ggatcaggatggggggatccctcccagtcactcagcaaagcaccaaatggcactacaagt
ggctggggagatcctttgcctaccaatggtcctaaaagtgggggcacaccatcctggggt
tctgaggacaagtcacccagctgggatcaaggcatgatgaaaagccagccgactagctgg
ggagagggccctaaaagctcccatggttggggcaacaataatgggggcaccaatggcacc
accagcacaggggactggggagagccagatgtcaagaacaatgggtcctccagcagtatg
tgggaaagtgaaggaggtaatggaggaagtggtggctggaaggaaagcccaagaggagga
agtagaggaggaaactggggtaaacctgctcctgctgtaagtaacagcaactggggggag
agcccacgtgccaatggctcattgcagggaggctggggttcttccaagccccaggaaagc
agcagcagcagcagcacaggcagtggaggaggtggcagcattggttcttggggtggtcct
ggttctgtaaagcagagcaactctggttggggaaatgtcagcaaacaggatcaaagcatg
gagcctactggctgggaagagccttctcctccttccatccgcaggaaaatggaaattgat
gacggaacttccacctggggcgatcccaacgcctacagcaaggctgtcaacatgtgggat
cgtaacaaccccaacggtaacccaggcaacggcgggccacctcccaataagaatggtgga
atgattatgcccaacaataataacaacaatcactctgttgtccccggcaacaataatcac
catcactctcaccacatgcaccaccatccccatcatggtcagcccccaaccatgcaacac
catggaaacaacaatggatcacccaacaataccacctcacatccagttgctggcccccag
ggtagaccccccctcgccaacccaggttggggagaacttcccagtgttcagcccaagtca
gagcctgcttggggagagccagcagctccaacgtcagctgtggataatggtacctctgcc
tggggcaagcccccaggtggagtcggaggatggggagatggtggccatgagccctctggc
ccttatggcagagccaatggacccccaggttctgcaccttgcaagccaggccccaaacct
atgcaagatggctggggaagtgcaggagaggagatgggtatgtccactggccaatgggac
actgaggatggggatgtatggaacagtcccacctcccaggagagcagctcctcctgcaac
tcctggggcaatggacccaagaagtgcccaagcaaggggaagatgggtaccaagccagat
gaggcttggatcatgaaccgtctcatcaaacagctcactgacatgggctttccgagagac
cctgctgaggatgcattgaagagcaacaatatgaaccttgaccaggccatgaccgcgctg
ttagagaagaagacggacctggacaagcgggtcatgggcatatctgattacagcaatggt
atgaacaagcctcttgtgtgtcggccctctgcactctccaaagacccctccgaccgcacc
acctttctcgacaaggatggtgtcctgtcagatgacgcccccccatcaccatttctgcct
tcccccagcctgaagctccccctggccaacagtagccttcctggacagggtttgggacag
ggcaatccgggactggccatgcaaaacttgaacaacagacagatacccagtggaatgttt
ggcagtagtggagcagcacaaacccgggccatgcagcaacagcctcctcagccaccagtg
ccacctctcagctcctcccagcctagtctacgtgctcaagtgcctcagtttctctcccct
caggtccaagcacagctcttgcagtttgcagcaaaaaacattggtctgaaccctgcactt
ttaacctcaccaataaaccctcaacaaatgaccctgttgtaccaacttcagcaactgcaa
atggcgtaccagcgtttacaaatccagcagcagatgatgcaggcgcaacgcaatgtttcc
ggccccattagacaacaagagcagcaagttgcacgtacaatcaccaacatgcagcagcag
atccagcagcaccagcgtcagctgtaccaggcgctgctgatgaagcagcagcaacttccc
tctcattcctcctcttcctcctcctcgtccgctggtctgcatccccccggtggccctgct
ggaggccctggctccggcaaatcaaccctggaccccttcacaggcccacaccaggctcca
ggcctctccgacacactgcacaccaaagagccgccatcttcgcccaacgcctacagcacc
taccctctctctggactgaatccaaacatgaatgtaaactgcatggaggttgggggtctg
tccctgaaggagccccctcagcctcaatctcgcctgtcccagtggacacactccaactcc
atggacaacctcgctggcaactcttcaaatttggagaacaacctcaataaacacggtgcc
atatctgctgcctcttccctggtccctccggggaagcctccccagatggaggactcatac
agcccttacaatctaatctccagctctgagtcccccaccagccccctggtgccccctgat
agctggggccagggcaagagccctaacgaaaagatctccaatggaaccaacattaactgg
cccccagaattctgtccaggggtgccatggaagggccttcaaaacattgaccctgagaat
gaccccaatatgacccctggcagcgtccctagcggtcccaccatcaacaccaacatccat
gacgtcaaccgatacctgctgcgagacaggaatggaggtaaactgtctgacctgaaatcc
acctggtctccaggacccatctctcagagccaagcctctctgtcccacgagctgtggaaa
gtccctcaggggccgcgcaacaccacagcaccatcccggcccccgccaggcctcaccaac
aacaagccctcctccacctggggaggaaactcattgggcctggcccaaggttggagcggc
tcctactcctctgagggaaccacatggagtactgacagctccaacaggaccagcagctgg
ctggtgctgaggaatctcaccccacaaattgatggttcaactctgcggaccctgtgcatg
cagcatggccccctgatcacattccatctcaacctgacccaggggaacgcagtggtgcgc
tacagctccaaggacgaagctgccaaggcccagaagtccctgcacatgtgtgtgcttgga
aacaccacaatcctggcagagtttgccggtgaggaggaggtgaaccgcttctttgcacaa
ggccagtcgctaggggcaaacaccacaagctggcaggccaacccaggaaccaatcaaaac
cggatgggcggaacagcgcagtcccactctattggccagtggagcagcggtgccggtgga
ggcaagaccagcggaggcgacctgctgtggggcggggtgccgcagtactccagcctgtgg
ggaccgcctagtggagaggacgcccgtgtgattgggagccccactcccattaacaccctg
ttgcctggagatctgctgagtggggagtccatgtag
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