Amphiprion ocellaris (clown anemonefish): 111582450
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Entry
111582450 CDS
T06018
Symbol
tnr
Name
(RefSeq) tenascin-R isoform X1
KO
K06252
tenascin
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04510
Focal adhesion
aoce04512
ECM-receptor interaction
aoce04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111582450 (tnr)
04518 Integrin signaling
111582450 (tnr)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111582450 (tnr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
aoce00536
]
111582450 (tnr)
Glycosaminoglycan binding proteins [BR:
aoce00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111582450 (tnr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
EGF_Teneurin
FN3_DSCAM-DSCAML_C
Fn3_Dep-1_3rd
Pur_ac_phosph_N
EGF_Tenascin
EGF_2
FN3_Tor_3rd
Fn3_VIN3
Interfer-bind
DUF4998
DUF7949
Motif
Other DBs
NCBI-GeneID:
111582450
NCBI-ProteinID:
XP_054870342
Ensembl:
ENSAOCG00000009562
LinkDB
All DBs
Position
10:complement(16778822..16960789)
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AA seq
1386 aa
AA seq
DB search
MPLAQQHQRAAAPTTSWILALALFLALQGAAHAAPSGDNKLVRTTRVRRQAPGDDQPPFA
SSVNQTLREQPVVFNHVYNINVPLESLCSVDLDASAPPAPGDGSRAELGSRPSVEGPMDP
NGPTEYTEQTLDADSQVTFTHRINIPKAACGCPATTTIQQLATRVEMLEREVSLLRAQCG
SGCCGDSSVMGRLDFIPGCSGHGSFSFDLCGCICEEGWTGKNCSEPRCPNDCSGQGVCVE
GECVCDRDFGGDNCSEPRCPSDCSGRGLCIDGECVCEESFTGEDCMVGRCLNDCSDQGLC
VNGTCQCRPGYVGEDCSLVYCANNCSKKGVCKEGFCVCQDGFAGDDCNSVAPAMNLNVRE
VTDRTIDLEWEGSVVLTDFLVTYTPSSPGGVQLEIRIPGNTTTCTISGLEAGLEYNINVF
AVINNTISVPASITVWTYLSNPDGLVFKSITETSVEVQWQPFYYSFDGWEISFIPKDNDG
GMTAQLPSTITSFVQTGLRPGEEYTVNLVALRDQGRSQPVTATVITLIDGPTQLIVRDVS
DTVAFVEWTPPKAKIDQIVLRYGLVGGEGPRTTFRLQPTLSQYSLQVLRPGSRYEVSVSG
VRKGNESGSISTEFTTALSFFSEIDAPKNLRLVSKTSTTLELEWDNSEAEVEGYQVVYST
LAGDQYDKVIVPRNEGATTKTMLTDLLPGTEYGIGISAMKGSNQSTPATMNARTGLDVPL
DLTVTASTDNTITLVWGLVQGPIDHYKVTYTSSFGITTELTVPKDVTTTTLSDLEPGTEY
TITVAARRGRQQSTAATIDAFTGIRPVTHLYLSEVTSDSVSVAWSAPAPPADLFILSYSS
ADGTDTSKVTLDGSKTRSLVQGLLPSTQYTVSLITIQGDVTSEPITASLTTGMDPPKEMM
VSDVTEDSVTISWIKPLAPFEYYKLSYQSDRGRVDSMVIDSDVTNYTLSSLFPATEYEIS
LNAVRGSQESKVVSTSVFTAMDMPAELTALNITPQGALLRWNPPVSNVDNYVLTLTHNQV
TADTFLVEGHKQEHQLSNLKPSTTYSVSLYATKGPLTSGTVITNLQTPMDAPLNLTASEV
NHRSALISWQPPIAEIDNYMLTYKSADGSRKELILDAEDTWIRLEGLAETTEYTVKLQAA
RGLDTSAVVSTTFTTGSRLFATPQNCAQHLLNGETLSGVYTIYINRDPSQGVQVYCDMTT
DEGGWIVFQRRQNGLTDFSRKWSDYRVGFGNLEDEFWLGLDNIQKIAAQGRYELRIDMKD
GQQSVYANYDKFSIGDARNLYKLRIGEYNGTAGDSLSYHQGRPFSTKDRDNDIAVTNCAL
SYKGAWWYKNCHRANLNGKYGESRHSQGINWYHWKGHEFSIPFVEMKIRPFNFRSISNKR
RRSAPV
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atgccactggcacagcagcatcagcgggccgccgcgcccacaacaagctggatcctggct
ttggctctgtttcttgctctacagggtgccgctcatgctgctccatcaggagacaacaag
ctggttcgtaccaccagagtgaggaggcaggccccgggggacgatcaaccccccttcgct
tcctcagtcaaccagaccctgcgggagcaacctgtggtctttaaccacgtctacaacatc
aatgtgcccttggagtctctgtgctccgttgacctggacgcctctgcaccacctgcccca
ggtgatggttctcgtgccgagttgggatccagaccttctgtggagggaccaatggatccg
aatggaccaacagaatacactgagcagacgctggatgctgacagccaggtaacattcact
caccgcatcaacatcccaaaagcagcatgtggctgtcctgcaacaaccacaatccagcag
ctcgccaccagggtggagatgctggagagagaggtttcactgcttagagctcagtgtgga
tctggatgctgtggagacagctcagtcatgggccgtttggacttcatcccaggctgcagc
ggccacggcagcttcagctttgacctgtgtggctgcatttgcgaggaaggctggactggc
aaaaactgctccgagcctcgctgccccaacgactgctccggccagggtgtgtgcgtcgaa
ggggagtgcgtgtgcgaccgtgactttggcggtgacaactgctcagagccgcggtgccct
tcagactgctcgggccgagggttgtgcatcgacggggagtgtgtgtgtgaggaatccttc
accggcgaagactgcatggttggaaggtgtcttaatgactgctcggaccaggggttatgc
gtcaacgggacgtgccagtgccgacccgggtatgtgggagaggactgttcgctggtctac
tgtgccaacaactgcagcaagaagggagtctgcaaagagggcttctgtgtctgccaggat
ggctttgctggagacgactgcaactctgtggccccggccatgaacctgaatgtacgagag
gtgacggatcgtactattgacctggagtgggaggggtctgttgtgctgacagatttctta
gtgacctacacaccaagcagccctggaggtgtgcagctagagataaggattccaggcaat
accaccacctgcactatctcagggctggaagcaggcttggagtacaacatcaatgtgttt
gctgtcattaacaacactatcagcgttcctgccagtatcactgtttggacctatctctcc
aatccagatggtttagtcttcaaatccatcacagagacgtcggtggaggtccagtggcaa
cccttctactattccttcgacggatgggagatcagcttcatccccaaggacaatgatgga
gggatgactgcgcagcttcccagcaccatcacttcttttgtgcagactggcttgaggcct
ggtgaagagtatacagttaacctggtggcgcttcgagaccagggccgaagccaaccagtc
actgctactgtcataacattgattgatggtcctactcagctgattgtgcgagacgtgtca
gacactgtggcatttgtggagtggacaccaccaaaagcaaagattgatcagattgtgtta
cgttatggtctcgtgggaggagaagggccacggaccaccttccgccttcagcccacactt
agccagtactctctgcaggttctgcgtcccggctctcgttacgaggtgtctgtgagtggt
gtgaggaaaggaaacgaaagcggatctatttccactgaatttactaccgctttatcattc
ttctcagagatcgatgcccccaagaacttgcggctcgtgtccaagacctccacaaccctt
gagctcgaatgggacaacagtgaagctgaggtggagggctaccaggtggtgtacagcacg
ctggcaggagatcagtatgataaagtcatcgtaccacgcaacgagggagccaccactaag
acgatgctcacagacttgcttccaggcacagagtatggcatcggcatttctgccatgaaa
ggtagcaaccagagtaccccggcaacaatgaatgccaggacgggtctggatgtaccattg
gatctaactgtgacggcgtctacagacaacaccattactctggtgtggggcctcgtccag
ggccccatcgaccactacaaggtcacctacacatcttcctttggcatcactactgagctg
acagtacctaaagatgtaaccaccaccactctgtcggaccttgagcctgggactgagtac
accattactgtagcagcaagaagaggaaggcagcagagcactgcagccaccatagacgcc
ttcacaggaatcaggcctgtaacccacctctacttgtcagaagtgacttcagactctgtg
tcggtggcatggagcgccccagcgccgcccgctgacctcttcattctgagctacagctct
gccgacgggaccgacacctctaaggtgacgctggacggctccaagacgaggtcactggtc
caggggctgctgccatccactcagtacaccgtcagtctaatcacaatacagggggatgtt
acctctgagcccattacagcgtcactcacgacaggcatggacccaccgaaggaaatgatg
gtgtcagatgtgaccgaggactcggtgaccatctcttggatcaaaccactggctccattt
gaatactataagctctcctaccagtcagacagaggtcgagtggacagcatggtgattgac
agcgacgtgacaaactacaccttgtccagtctgtttcctgctacggaatatgagatcagt
ctcaacgctgtcagagggagtcaggagagcaaagttgtcagcacttctgtcttcacagcg
atggatatgccagctgagttgacggccctcaacatcactccacaaggagccctactgagg
tggaatccccccgtatccaatgtggacaactatgtgctgaccctcacacacaaccaggtg
acggctgatactttcctggtggaaggccacaagcaggagcaccagctgtctaaccttaag
ccaagcaccacctactctgtatccctctacgccaccaaaggacccctcacaagtggaact
gtcatcaccaacctccagacgcccatggacgcacccctgaacctgacagccagcgaagtg
aatcatcgcagcgctcttatttcctggcagccaccaattgcagaaattgacaactacatg
ctcacctataagtctgcagatggcagccggaaagagctgatcctcgatgcagaggacacg
tggattcgactggagggattggctgagactacagagtacactgtcaagctgcaggctgca
agaggactagacaccagcgctgtagtctccactacctttactacagggagtcgcctgttt
gcaacacctcagaactgtgcccaacacctgctgaacggagagactctgagcggcgtctac
accatttacatcaacagggaccccagccagggtgtgcaggtgtactgtgacatgaccaca
gatgaaggaggctggattgtattccagcgtcgtcagaatggcctcacagacttttccagg
aagtggagtgattatcgggttggctttggaaacctggaggatgagttctggcttggtcta
gacaatatccagaagattgctgctcagggccgttacgagctgcggattgacatgaaggat
ggacaacagtcagtctacgccaactatgacaagttctccattggagatgcaagaaacctc
tacaagctcaggataggagagtacaatggcaccgctggtgactccctcagctaccaccag
ggccggcccttctctacaaaagacagagacaatgacattgctgtcactaactgtgccttg
tcatacaaaggagcctggtggtacaagaactgccaccgggccaaccttaacggcaaatac
ggcgagtccagacacagtcagggtatcaactggtaccactggaaaggccatgagttttct
attccctttgtggagatgaagatcaggccgttcaacttccgtagcatcagcaacaagagg
aggcggtctgcccctgtataa
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