Amphiprion ocellaris (clown anemonefish): 111582463
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Entry
111582463 CDS
T06018
Symbol
rabgef1l
Name
(RefSeq) rab5 GDP/GTP exchange factor
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
111582463 (rabgef1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aoce04131
]
111582463 (rabgef1l)
Membrane trafficking [BR:
aoce04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
111582463 (rabgef1l)
Protein recycling
Other Rab GTPase associated proteins
111582463 (rabgef1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
CID_GANP
EST1
Motif
Other DBs
NCBI-GeneID:
111582463
NCBI-ProteinID:
XP_023146910
Ensembl:
ENSAOCG00000001989
UniProt:
A0A3Q1CBU4
LinkDB
All DBs
Position
7:complement(4009502..4016381)
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AA seq
507 aa
AA seq
DB search
MMMSQRRGIHLDQSELLCKKGCGFYGNTGWQGLCSKCWREENQREKQKQIQEDWALAERL
QREEEEAYASRHQKTQSQQSITPFSKFEERKTKEKSSKVNTVTKFFTPSSKTPPKKDAAL
FDSQSSPSPSSSASRHSSVDSDHATREFIDFLKPLKSGREIFKQCRAFTESMVYKRDMGA
DELSECVQDFYQNLSERLQTQFKGSTDHVESVMDEVEKYMMTRLYKEVFCPETTDDEKKD
LAIQKRIRALHWVTIEMLCVPVDEEIPEVSDSVVKAITDVIEMDSKRVPKDKLACITRCS
KHIFNAIKVSKKEAASADDFLPTLIYIVLKANPPRLQSNIQYITRFCNPSRLMTGEDGYY
FTNLCCAVAFIEKLDGQSLNLSSEEFELYMSGQASPHWPQASGASSCSPGSAALSQVHKR
LDLLTGLGERQERVMEKARQLESDLIDWTDEVEQKVQSVLESFPLETQNPPANTASGTTS
AASSAIDSDNVENELLPPPLTPQVFAG
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgagccagcggcgaggaattcatctggaccaatcagagctgctttgcaagaaa
ggatgtggtttttatggcaacactggttggcaaggcctgtgctcgaagtgctggcgagag
gaaaatcagcgagaaaagcaaaaacagattcaagaagactgggcacttgctgagaggctg
cagagagaggaagaggaagcatatgcaagcagacatcagaagacccaatcacagcagagc
atcacacccttcagcaagtttgaagaaagaaaaactaaggaaaagtccagcaaagtcaac
acagtcacaaagttttttactccatccagtaaaacaccaccaaaaaaagatgctgctctt
tttgactcgcagtccagcccaagtcccagctcctcagcaagccgacattcctctgtggac
agtgatcacgcaacacgagagttcatagattttctcaagcctctgaagtctggcagggag
atcttcaaacagtgtcgagccttcactgagagcatggtctataagcgggacatgggcgct
gatgagctgtcagagtgcgtgcaggacttctaccagaacctctcagaacgcctccagacc
cagttcaaaggttcgacagatcatgtagagagtgttatggatgaggtagagaagtacatg
atgactcgtctctacaaggaagtcttctgtcctgaaaccacagatgatgagaagaaagac
ctggccatccagaagagaatcagagccttgcactgggtcaccattgagatgctgtgtgtt
cctgtagatgaggagattcctgaggtctctgacagtgtagtcaaagccatcacagatgtg
attgaaatggattcgaagcgtgtgcccaaggacaaactggcctgcattactcgctgcagc
aagcacatcttcaacgccatcaaagtcagcaagaaagaggctgcatctgcagacgacttc
ctgcccacgctcatctacattgtgctgaaagcgaaccctcctcgactgcagtccaacatc
cagtacatcacccgtttctgcaaccccagcagactcatgactggagaggatggttactat
ttcactaatctgtgctgtgctgtggccttcattgagaagctggatggccagtctctgaac
ctaagctctgaggagtttgagctctacatgtcaggccaggcttccccccactggccacag
gcctctggagcctcctcctgctctccaggcagcgcagctctcagccaggtccacaaaagg
ctggacctgctaactggactcggagaaagacaggagcgggtcatggagaaggctcggcag
ctggagagtgacctcattgactggacggatgaagtggagcaaaaggtgcagagcgtcctg
gagagctttccactggagacacaaaacccccctgcaaacactgccagtgggacaacatct
gcagcatcatcggcgatcgactccgataatgtcgagaacgagcttcttcccccaccactg
acaccacaagtgtttgctggttga
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