Amphiprion ocellaris (clown anemonefish): 111582566
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Entry
111582566 CDS
T06018
Symbol
hnrnpa1b
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1b
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111582566 (hnrnpa1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoce03019
]
111582566 (hnrnpa1b)
03041 Spliceosome [BR:
aoce03041
]
111582566 (hnrnpa1b)
Messenger RNA biogenesis [BR:
aoce03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
111582566 (hnrnpa1b)
mRNA cycle factors
Common to processing body (P body) and stress granule
111582566 (hnrnpa1b)
Spliceosome [BR:
aoce03041
]
Common components
Common spliceosomal components
hnRNP proteins
111582566 (hnrnpa1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
RRM_3
Motif
Other DBs
NCBI-GeneID:
111582566
NCBI-ProteinID:
XP_023147075
Ensembl:
ENSAOCG00000028290
UniProt:
A0AAQ5X864
LinkDB
All DBs
Position
8:complement(30283774..30287565)
Genome browser
AA seq
333 aa
AA seq
DB search
MSKDVPREPEQLRKLFIGGLSFETTDESLRAHFEQWGSLTDCVVMRDPNSKRSRGFGFVT
YSSVQEVDAAMASRPHKVDGRVVEPKRAVSREDSNRPGAHVTVKKIFVGGIKEDTEESHL
RDYFQQFGKIEVIDIMTDRNTGKKRGFAFVTFDDHDSVDRIVIQKYHTINCHNCEVRKAL
TKQEMQNAGMGMRGGRNSGGRPYDCDRGFNQGGRGRYGDGPYNCNGGDGGYGGGPGGPGG
YNNGNRGYNQGYNQGGGGGGGYGGNGYDSNGYGNCGSGGGGNSYNMGHYDPQASNFGPMK
NNFGGGGGGGGRSFGGYGGGSNNGGGYGRPGRF
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaggacgtcccacgtgagccggagcagcttcgcaagctcttcatcggaggtttg
agcttcgagaccacagacgaaagcctgcgggctcattttgagcaatgggggagccttaca
gactgtgtggtcatgagggacccaaacagcaagaggtccaggggttttggcttcgttacg
tactcatcagtacaagaagttgacgctgctatggcttcccgcccccataaggttgatgga
agagtggtagaacctaagcgagctgtttctagggaggactcaaaccgaccaggtgcccat
gtaacagtcaagaagatctttgttgggggcatcaaggaagatacagaggagtcacacctg
cgggattacttccagcagtttggcaaaatcgaggtcattgacatcatgaccgatcgtaac
actggaaagaaaaggggatttgcttttgtcaccttcgatgaccacgattcagtcgacagg
attgtcatccagaaataccacactatcaactgtcacaactgtgaagtgaggaaggccctc
acgaaacaggaaatgcagaatgctggaatgggaatgaggggaggtcgtaacagtggcgga
aggccctatgactgcgacagaggcttcaatcagggtggcagggggagatatggagatggc
ccttacaattgcaatggaggtgatggcggctatggaggtggcccaggtggtcctggtgga
tataataatggcaaccgtggatataatcagggttacaaccagggtggtggaggcggcggc
ggctatggaggaaacggttatgacagcaatggttacggcaactgtggcagtggaggtggc
ggaaatagctacaatatgggccactacgacccccaggcctcaaactttggccccatgaag
aacaactttggaggtggcggcggcggtggtggcaggagctttggtggctacggaggcggc
tcaaacaatggtggtggctatggccgtccagggcgattctga
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