Amphiprion ocellaris (clown anemonefish): 111582651
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Entry
111582651 CDS
T06018
Symbol
ltn1
Name
(RefSeq) E3 ubiquitin-protein ligase listerin isoform X1
KO
K22377
E3 ubiquitin-protein ligase listerin [EC:
2.3.2.27
]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aoce03009
]
111582651 (ltn1)
04121 Ubiquitin system [BR:
aoce04121
]
111582651 (ltn1)
Enzymes [BR:
aoce01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111582651 (ltn1)
Ribosome biogenesis [BR:
aoce03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
111582651 (ltn1)
Ubiquitin system [BR:
aoce04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111582651 (ltn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LTN1_E3_ligase_6th
UBC_like
Ltn1_1st
LTN1_E3_ligase_5th
zf-RING_2
zf-ANAPC11
FANCL_C
zf-rbx1
RINGv
zf-RING-like
zf-RING_16
zf-C3HC4_2
C1_1
Motif
Other DBs
NCBI-GeneID:
111582651
NCBI-ProteinID:
XP_023147223
Ensembl:
ENSAOCG00000001701
LinkDB
All DBs
Position
14:complement(12234975..12249817)
Genome browser
AA seq
1771 aa
AA seq
DB search
MGGKNKQRTKGNVRPSSSGRAAEVLTREGGVIPGFVGFGSAVTSELSYVPAVHGAEDIDN
LVDADFRLVLRKLSKRDVVTRLKAVQDFGSMCQERDAEEVKGVLPYWPRIYCKISVDHDR
RIREATQQAFEQLVLKVRRSLAPFLKSLMGHWILSQCDTYTPAASAACQAFQAAFSPTKQ
PEALSFCKDEILSVLQDILLKETADTLSDPQSVTEEERDTKYVRMLTSSLLGVKRLLSLL
LPEDRVALEEKLAHLVNSGKFWKYSKHKTPQVRGAFFEMVCALCEFTPGLVQAEAARLCP
TVLLSIDDTDPVVLPPVWEAVLHVVSTIPDCWTHVNAKKGFLPKLWALLKEGGKGMAKAL
HPNLMPLLSKLPPQVTDPNLDFYTTFFTAFVQGLSSERAVTSPSESAVIVTSFVECMRYC
VLHNIEEDEDQRKIRTMLISQQLLPLLEESLRNPSLQNGPLFLLGTEMLISWEKRAGLHS
EGEANDNKDVFQRLLVDFWEDLGLLLVRYVDNEDADPQALEGVASLLQVMRYPERVNKRH
VHKKKSVRMCFSKPEDNEKTGVEGDGVEKLVQTVSELVNEKAFGSLQTQHFEDVVCQLAQ
LCLVHVNEKNSERHLVFLSLLLRSFHTSRVFSTLVEVDDKITKDDKQRDEVIMKNPAMHF
LLERVVVWLAEKGRRDTEHLVEMVFSSLYCCSRQETTRILSHITTMDLQWGIILQIIQRA
CTDPETLQSCSDWLKGSVLGEQLLGLTEELCKVGSSSYVSTSSTSSHSWTLISLVLSQRH
NNESLIGEVYMEKILEKLHTTLLETKSLSDAGNMEPLISFICDVASTFFSSVQDCLLLVS
AEELLLTVFQLTAQDQTHTHMSDSLLDKLKKVCAAGVQSLVQHCDYEVTEGGFLHSAAVW
VTKQLLTVSLDIKGLQVLVLAVQSLVETIISVCDRASDILIQFFTFLMPSQTEWTRIRLA
LPLQWIKTPLLSSRHRGVCENPSMDIWRFRESNRLPAHLCACALLGKVAQTAVLKSCDQK
DAECPSSLPDLKYTVSELLYALQWCKEVKYSPTTVSAYHNLLTDWGLSDGLHSQVPVKTL
LETLYARSVSDGGLWSLALENYICTNNLADAHRAAVRKLYGSASSLFPVSQSKLSTLQVL
CPIMTQEDRETLVALATAGLVNWQENEDVYGCLAVLLCCLQANTHVEEEVVLAILATVME
WRNSREDWFLFSSDISKATAEQLNLSVEIMRFLSWLVTHCPTVLGGSQWDFLLCSMLAWL
ETASENVSSLWNPWVQLFVCENAALIVKLNQFFTSSSSELLEKLPSELAGEWTDFFIEGI
YNLLLPLPVKITDAFTEPDDPLFPMAVLQSVGMALIFVPVPQLNQNSLPPRFIADQKTNL
PEPLQTLLNTFCPLLLFKARPLQITVYHLLEKVMPQLPECDGEEDSNKSDDDRDEPCLSP
PASLMAILSTCEELCDNILAAVQVGEFAVVQPLSVEYSCILGYLLTWKLLLTFFKSSPSH
LRAHYAQYLKRSCSLNKLLLHLFKLMPENPVYPSHGSETRETKTFFTEGLFLAVNTETDG
VEWELPHLACSVYYSTVQDLPAMVRLWWNSQEKRVSAAVEKFTIKYVSPVLSAQEISSVH
TSTQMFDSMTVKARSAAREVIATYSVDDIFIELVIQLPQNYPLGSITVESGRRVGVAVQQ
WRNWMLQLSTYLTHQNGSIMEGLALWKNNVDKRFEGIEDCMICFSVIHGSNYSLPKKACR
TCKKKFHSACLYKWFTSSNKSTCPLCRETFF
NT seq
5316 nt
NT seq
+upstream
nt +downstream
nt
atggggggtaaaaacaaacagcgaactaaaggaaatgttaggccgtccagcagcggccga
gctgctgaggtactgacccgagaaggaggtgtcatcccggggttcgtgggcttcggctcg
gcggtcacttcggagctgagttatgtgccagctgtccacggcgcagaggacatagacaac
ctggtagatgccgacttccggctggtgctgagaaaactctccaagagggatgttgtcacc
agacttaaagctgtgcaagactttgggtccatgtgtcaggagcgggatgccgaagaagta
aagggggtcctcccatactggccaaggatttactgcaaaatatcagtggatcatgatcgc
cgcatcagagaggctacccagcaggcctttgaacagttggtgctaaaagtgcgccgcagc
ttggccccctttctgaagagtttgatgggccactggattttgtcccagtgtgacacttac
acacctgcagcctctgctgcctgccaggccttccaggctgccttctcacccaccaaacag
cccgaggctctcagcttctgcaaggatgagatccttagtgtacttcaggatattttgtta
aaggaaacagcagatacactgagcgatccacaaagtgtgacagaagaggagagagacacc
aaatatgtgcgcatgctgaccagttctctgttgggggtgaagagactgctctccctgctg
ctgccggaagacagggtggccttggaggaaaaactagcacatcttgtcaactctgggaag
ttctggaagtacagcaaacacaagacaccacaggtgagaggggcattttttgagatggtg
tgtgctctgtgtgagttcacgccaggactggtccaagctgaagcagcacgactctgtcct
actgttctcctcagcattgacgacacagatcctgtggtgctgccccctgtgtgggaagct
gttcttcacgttgtgtccacaatccctgattgctggacacatgtgaatgccaagaaaggt
ttcttaccaaaactttgggctctgttaaaagaaggtggcaaaggcatggctaaagcactt
caccctaatctaatgccgcttctcagcaaacttcctccacaggtcactgatccgaacttg
gatttctacaccacgttcttcactgcattcgtacaaggtctgtctagtgagcgtgcagtg
acaagcccatcagaaagtgcagttatagtgacatcttttgttgagtgcatgaggtactgc
gtattgcacaatatagaagaagacgaggaccagaggaaaataaggaccatgcttatttca
cagcagctcctacccctattagaagagtccctcagaaatccttctcttcagaatggtcct
cttttccttttgggcactgaaatgctcatttcctgggagaagagggcaggtttacatagt
gaaggcgaagcaaatgacaacaaggatgtgtttcaaagacttctggtagacttctgggag
gaccttggtctgctgttggtgcgctatgttgacaacgaagacgcagatccacaggctttg
gaaggagtggcctcattgctgcaggtgatgcgttaccctgagagggtaaacaaaaggcac
gtccacaagaagaaatctgtcaggatgtgtttctctaagccagaagacaatgagaaaact
ggagttgagggggatggcgttgagaagcttgtgcagacagtgtcagagcttgttaatgag
aaggcatttgggtccctacagacccagcattttgaagatgtagtgtgccagctggcacag
ctgtgtctggtgcatgtgaatgagaaaaactcagagagacatcttgttttcctctctctt
ctcttgcgatctttccacacatccagggtcttcagtactttggttgaagtggatgataag
ataacaaaggacgataagcagagggatgaggtgattatgaaaaatccagcgatgcacttc
ttgctggagcgggtggtggtgtggctggcagagaaggggcgcagagacaccgaacacctg
gtagagatggtcttcagctcgctctactgctgcagcaggcaggagaccacccgcatcctc
agccacatcacaacgatggatttacagtgggggattatccttcaaattatacagagggca
tgtacagatcctgagacacttcagagctgtagtgattggctgaaagggtcagttctgggt
gaacaactcctgggattgactgaagagctgtgcaaggtgggcagcagctcttacgtttcc
acctcctctacaagcagccacagttggacgcttataagcctggtcctctctcagcgccac
aacaatgagtctctgataggagaggtgtacatggagaagatcttagagaagctccatacc
actttattggagactaagagtctgtcagatgcaggcaacatggagccgctcatctccttc
atctgtgatgtggcctccactttcttctcctctgtacaagactgtcttctactagtctct
gctgaggaactgttgcttactgtctttcagctcactgcccaagatcaaacacacactcac
atgtccgactcacttttagataagctgaagaaagtgtgtgcagctggagtccagtcactg
gtccaacactgtgactatgaagtcacggaaggcggctttctgcacagtgcagctgtttgg
gttacgaagcaacttctcaccgtctctctagatattaaaggtttacaggttctagttctg
gctgtacaaagtctagtggagacaatcatctcagtctgtgatcgagcctcggacatcctc
atccagttctttaccttcttgatgcctagccagacagaatggacaagaatcagactggcc
ttacctcttcagtggatcaaaacccctttattgtccagccgtcacagaggagtctgtgaa
aatccctccatggacatctggaggtttagggagtcaaacaggctgccagcccacctatgt
gcctgtgctctcctgggaaaggtggcccagactgctgtgcttaaatcttgtgaccaaaag
gatgcagagtgtccttcatccctaccagacctcaagtacacagtttctgaattgctttat
gcactgcaatggtgtaaggaggtgaagtacagccccacaacagtgtctgcctatcacaac
ctactgactgactgggggctgtcagacggactccacagccaggttccagtgaaaaccctg
ctcgagacactctatgcaagatcagtgtctgatggaggtctatggtcactggctctagaa
aactacatctgcaccaacaatttggcagatgctcaccgtgcagctgtgaggaagctttat
ggtagtgcaagcagtttgttcccagtgtctcaaagcaaactgagcacgctccaggtgctc
tgccccatcatgacacaagaagacagagagactcttgtagctttggccacagctggatta
gtcaactggcaagagaatgaagatgtgtatgggtgcctggcagtgctgctgtgctgtcta
caagccaacacacacgtagaggaggaggttgtgctggctatcctggctactgtgatggaa
tggaggaacagcagggaggactggtttctctttagcagtgacatttctaaagcaactgca
gaacagctgaaccttagcgtggagattatgcgtttcctgtcctggctggtgactcattgt
ccgacagttcttgggggaagccagtgggacttcttgctgtgctccatgttagcctggttg
gagactgccagtgagaatgtgagcagtctatggaacccatgggtgcagctgtttgtgtgt
gagaacgctgcattgatagtgaagctgaaccagttcttcacatcatcttcgtccgagttg
ctggagaagctgccgtcagaactggctggtgaatggacagacttcttcatagagggaatc
tataacctgctgttgcctttgcctgtcaagatcacagatgccttcactgaaccagatgac
ccgctgttccctatggcagtacttcagtcagttggcatggctctgatatttgtgcctgta
ccacagctaaaccaaaactccctgccacctcgattcatagcggaccaaaagacaaacctg
ccagagcctcttcaaacactcctcaacactttttgccctctgctgctctttaaggccagg
cctcttcagataactgtctaccacctgctggaaaaagtaatgccccagctgcccgagtgt
gatggagaagaagacagcaataagtctgatgatgacagagatgagccatgtctttcccct
ccagcttccctgatggccatcctgtcaacctgcgaggagctgtgtgataatatcttggca
gctgttcaagtgggagagttcgcagtggtccagcctctcagtgtggagtactcttgcatc
ctgggatacttgctgacttggaagctgcttctcacttttttcaaatcctcgccctcccat
ctgcgtgcccattatgcccagtatcttaagagaagctgctcccttaacaagcttctactc
cacctcttcaaactgatgcctgagaaccccgtctatcccagtcatgggtcagagacaaga
gagaccaaaaccttctttacagagggcctgtttctggctgttaacacagagactgatggt
gttgagtgggagctccctcacctggcttgcagtgtgtactacagcacagtgcaagacctg
cctgccatggtgcggctgtggtggaacagccaggaaaagcgagtgagcgcagccgtggag
aagttcaccattaaatacgtcagtcctgttctctcggcccaagagatctcctcagtccac
accagcactcagatgtttgacagcatgactgtcaaggcccgctcagcagcacgggaggtg
attgctacctattctgtggatgatatcttcatcgagttggtgattcagcttccacagaac
taccctctaggctctatcactgtagagagtgggaggcgtgtgggtgttgctgtacagcag
tggaggaactggatgctgcagctcagcacctaccttacacatcagaatggcagtataatg
gagggcctggctctgtggaagaacaatgtagataagcgttttgagggaatagaggactgt
atgatctgcttctctgttatacatggctccaactactccctgcccaagaaggcttgccgc
acctgcaaaaagaaattccactcagcatgtttgtacaaatggttcacttccagcaacaag
tccacctgcccactctgcagagaaaccttcttttaa
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integrated database retrieval system
