Amphiprion ocellaris (clown anemonefish): 111582719
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Entry
111582719 CDS
T06018
Name
(RefSeq) protocadherin-1 isoform X3
KO
K16498
protocadherin delta 1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
111582719
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
aoce01009
]
111582719
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
aoce04515
]
111582719
Protein phosphatases and associated proteins [BR:
aoce01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111582719
Cell adhesion molecules [BR:
aoce04515
]
Cadherins
Protocadherins
111582719
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Fibulin_C
PepSY
PDGLE
Motif
Other DBs
NCBI-GeneID:
111582719
NCBI-ProteinID:
XP_023147316
LinkDB
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Position
13:complement(632132..895701)
Genome browser
AA seq
1090 aa
AA seq
DB search
MALPRWGVLLVLAVVLLASCGAAPTDILYRVPEEQPPNTLIGSLASDQGLPDTGHLYKLE
VGSPYLRVDGKTGDIYTTEIPIDRETLRDCRNLFPGDKCFLEFEVSITDMVKGIGSGPRL
IEGRIEILDINDNTPQFSSPILTLSIPENTHIGALFSIPVATDKDSGDNGIAEYTLTAGP
DADQLFSMQVVVDTDEKLPQLIVMGNLDREKKDSYDLNIRVVDGGKPPRASSALLRVTVT
DQNDNAPKFERSQYEAELPENSPLGHSVLQVRANDADTGSNGEIDYSLHQAPETVQRLLR
IDRSSGVIYVKGLVDREEENFLKFFVVARDRGPTSKSSKVLVTINVKDRNDNQPAIEIRG
IGLVTHQDGVANISEDMPIGTPVALVQVSDRDEGENAVVTCVVAGDVPFQLRPASESAND
RKRKYFLQTTTLLDYERVKDYRIEIVAVDSGNPALSSTNSLKVQVTDMNDNTPTFSPAML
EVDFAEGNHPGDKVLDVVATDADSGTNAELVYSIIELSATRLFEIDAVTGEVRVKNLLDR
EETERYEFRVTAADKGVPSKTGTATVVINVLDRNDNDPKFMLNGYSFSVNENMPPLNPVG
VVTVTDADKGENSRVRLFVEPDNGKFVVQNGTGTILSSISFDREKESTYTFRLKAVDAGE
PPRSSYVGVTINVLDENDNAPYVTKPANSSYTYLTPVTPLDTRVEVVEAEDIDAGPNAEL
YYSITGGNPYGLFEISPSSGEITLAQEFTGKHNGLHRLVVKVSDKGKPARHTTALVHVFV
NDTKSNVSLIEALVGHSLYTPLDRDIAGDPNYALAQRSNILYGSLAGIAGVILVIVAVVV
IRHRLQKDTKSGYQAGKKESKDLYAPKQGPKNGKGKKSKKGKAPKPAKPLEEDEEASLQK
GLKFNLINDNVNDSPRIHLPLNYPPGSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQAVQ
DLPATNTFVGTGDNNSTGSDQYSDYSYKANPPKYSNKQLPHRRVTFSTANQAQDLQDASQ
HSYYDSGLEESETPSSKSSSGPRIGPLALPEDHYERTTPDGSIGEMEHPENGGASSSTQP
ERAAGQKRLP
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcccaggtggggggttctgctggttctggccgttgtcctgctggcctcctgc
ggcgccgcgcccaccgacatcctgtaccgggttcctgaggagcagccgcccaacacgctg
atcggcagcctggcgtcggaccagggcctgcccgacaccggacacctctacaagctggag
gtgggctcgccctacctgagggtggacggcaagacgggcgacatctacaccaccgagatc
cccatcgaccgcgagacgctcagggactgccgcaacctgttcccgggcgacaaatgcttc
ctggagtttgaggtgtcgatcaccgacatggtgaagggcatcggctcggggccgcggctc
atcgagggccgcatcgagatcctggacatcaacgacaacacgccgcagttctcctcgccc
atcctcacgctgtccatccccgagaacacgcacatcggcgccctcttctccatccccgtc
gccaccgacaaggactccggcgacaacggcatcgccgagtacacgctgaccgccgggccg
gacgccgaccagctcttcagcatgcaggtggtggtggacacggacgagaagctgccgcag
ctcatcgtcatgggcaacctggaccgcgagaagaaggactcgtacgacctgaacatccgg
gtggtggatggtgggaagcctcccagggccagcagcgctctgctcagggtcaccgtcacc
gaccagaacgacaacgcccccaagttcgagaggagtcagtacgaagccgagctgccggag
aacagtccgctgggacactcggtgctgcaggttcgagccaatgacgccgacactggcagc
aacggagagattgactacagcctccaccaggcgccggagacggtccagaggcttctgcgt
atcgaccgctcctcaggcgtcatctacgtcaaaggtctggtggaccgagaagaagaaaat
ttcctcaagttctttgtggtggccagagatcgtgggcccacctccaagagctccaaggtc
ctggtgaccatcaacgtcaaggaccgcaatgacaaccaacctgccatcgagatccgcggc
atcggcttggtaacacaccaggacggtgtggccaacatctccgaggatatgcccatcggc
acaccggtggcgctggtgcaggtgtcggaccgcgacgaaggggagaacgcggtggtgacg
tgcgtggtcgccggcgacgttccatttcagctccggcctgcgagcgagtcggccaacgat
cggaagaggaaatacttcctgcagacgacgaccctgctggattatgagcgcgttaaggat
tacaggattgaaattgtcgctgtggattctgggaacccggcgctgtccagcaccaactcc
ctcaaagtccaggtcacggacatgaacgacaacacgcccaccttttcccccgccatgctg
gaggtggactttgcagagggaaaccacccgggtgataaagttctggatgtcgtggcgacc
gatgctgacagtggcaccaatgcagagctggtctacagcatcatcgagctctcggccact
aggctgtttgaaatcgatgccgtcaccggggaggttcgtgtgaaaaacctgctggatcgg
gaagaaacggagcgctacgagttccgggtgacggcagccgataagggcgttcccagtaaa
actggcaccgctacagtggtgataaatgttcttgaccgcaacgacaacgaccccaagttt
atgctgaacggttacagcttctctgtcaacgagaacatgcctccgctcaaccccgttggt
gtagtaactgtcactgatgctgataagggcgagaattccagagtgaggctgtttgtggaa
ccagataacgggaagtttgtcgtccagaacgggacaggaaccatcctgtccagcatctcc
ttcgaccgcgagaaggagagcacctacactttccgtctgaaggccgtggatgccggtgaa
ccacctcgatcctcctacgtgggcgtcaccatcaacgtcctggacgagaacgacaatgcc
ccctacgtcaccaagccggctaactcctcctacacctacctgacacccgtcaccccgctg
gacacccgtgtggaggtggtggaggctgaggacatcgacgccgggcccaacgctgagctg
tactacagcatcacaggcggaaacccgtacggactgttcgagatctcacccagcagcggt
gagatcacgctggcgcaggaattcaccggaaagcacaacgggctccaccggctggtcgtg
aaggtcagcgataaaggcaaacctgctcgccacaccaccgctctggtccacgtctttgtc
aacgacaccaagtccaacgtgtctctgatcgaggcgctggtcggccacagcctctacacg
cccctggacagggacatcgccggagatcccaactacgccctcgctcagcgcagcaacatc
ctgtacggcagcctggcgggaatcgctggcgtgattctggttattgtggccgtggtggtc
atcagacaccggctgcagaaggacactaagagcggctaccaggccggcaagaaggagagt
aaagacctgtacgctccgaagcaaggacctaaaaacggcaaggggaaaaagagcaagaaa
ggaaaagctccaaaaccagccaagccgctggaggaggacgaggaggcgagcctccagaaa
ggcctcaagttcaacctgatcaacgacaacgtcaacgacagtcccagaatccacctgccc
ctgaactatcctcccggaagccccgatctgggccgccactaccgctccaactcccccctg
ccgtccatccagctgcagccgcagtcgccctccgcctcaaagaagcaccaggccgttcag
gacctccccgccaccaacaccttcgtagggacgggtgacaacaactccacgggctccgac
caatattcggattacagctacaaggccaacccacccaaatacagcaacaaacagctgccc
caccgccgagtcaccttctccacggccaatcaggctcaggatctgcaggacgcctcccag
cacagctactacgacagcggcctggaggagtcggagacgcccagctccaagtcatcgtcg
gggccccggatcgggcccctggctctgcccgaggaccactacgagcggaccacacccgac
ggcagcatcggcgagatggagcacccggagaacggtggagcgtcgtcaagcacccagccg
gagagggcggccggacaaaaaagactgccttaa
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