Amphiprion ocellaris (clown anemonefish): 111582930
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Entry
111582930 CDS
T06018
Symbol
usb1
Name
(RefSeq) U6 snRNA phosphodiesterase 1
KO
K23093
U6 snRNA phosphodiesterase [EC:3.1.4.-]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aoce03041
]
111582930 (usb1)
Spliceosome [BR:
aoce03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Other proteins involved in snRNP biogenesis
111582930 (usb1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HVSL
Motif
Other DBs
NCBI-GeneID:
111582930
NCBI-ProteinID:
XP_023147583
Ensembl:
ENSAOCG00000014831
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Position
3:complement(35452481..35462755)
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AA seq
282 aa
AA seq
DB search
MLVGYSSSEEDGEADSEAAAAATDSRSYPGRRREEKEEDDDGLPARKKLKTEEEAPKSRL
PLPGCLLTMFPDEVDPQTDDSSLHGGRIRSFKHERGNWATYVYFPYRPEEEFEELLEELL
AAAANRGVVLTRQEEFHLSLSQTVVLRHHWIQPFTQSLRAGLAACRRFVCSAGKLRVYCN
AEKTRTFLGMQVSTGHAQLLDLVRVVDKTMTEFRLETFYEDPSFHVSLAWCVGDQTLNMK
ESMQELQSLVDDHEDGAFVLRLDCAELRCRTGNKTFRFPLEP
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgctggtcggctacagcagctcggaggaggacggtgaggccgacagtgaagcggcagcg
gcggctacagacagccgaagttaccctggaaggaggagagaagagaaggaggaggatgat
gatggtttacctgcaaggaagaaactcaaaacggaggaagaagctcctaaaagcagactt
cctctccccggctgcctgctgaccatgtttccagatgaagtggatccacagactgatgac
agctcactccacggcggacgcattcgctccttcaaacacgagagaggaaactgggccacc
tatgtttactttccataccgtcctgaggaggagttcgaggagctgctggaggagctgctg
gcggcggcggctaaccgaggcgtggttttaacccggcaggaggagttccacctcagtttg
tcccagacggtggtgctcagacaccactggatccagcccttcactcagagcctcagggcg
ggactggctgcctgcagaaggtttgtgtgttctgcggggaagctgagggtttactgtaac
gcagagaagacgaggacgttcctggggatgcaggtctctactgggcatgctcagttgttg
gatttggtgcgagttgtggacaaaacaatgacggagtttcgcctggaaactttctatgag
gatccttcattccacgtcagtctggcctggtgtgtcggagaccagacgctgaacatgaag
gaatccatgcaggagctgcagagtttagtcgacgaccatgaagacggagcgttcgtgttg
aggctggactgtgcagagctccgctgtcggaccggaaacaagacttttcgcttccctctg
gagccttaa
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